ywcA

ywcA
168

similar to Na+-dependent acetate symporter

locus
BSU_38240
Molecular weight
54.79 kDa
pI
7.2
Protein length
Gene length
function
unknown
product
unknown
essential
no
ec
null
synonyms
ywcA, ipa-31r

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG4147 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,924,225  3,925,766
Phenotypes of a mutant
''[gene|4583EA9A4DF9F9EC054437CFB1C3849EA7BD49FA|ywcB]-[gene|ADB447B0F8EA4F341FA48344AA958E6B98B9EFE4|ywcA]'' mutant has slightly reduced acetic acid transport [Pubmed|26060272]
''[gene|4583EA9A4DF9F9EC054437CFB1C3849EA7BD49FA|ywcB]-[gene|ADB447B0F8EA4F341FA48344AA958E6B98B9EFE4|ywcA]'' mutant shows earlier pellicle biofilm formation [Pubmed|26060272]
The protein
Catalyzed reaction/ biological activity
the protein is involved in acetate transport [Pubmed|26060272]
the protein is not involved in proline transport  [Pubmed|24142252]
Protein family
[wiki|sodium:solute symporter (SSF) (TC 2.A.21) family] (according to UniProt)
Structure
[AF|P39599]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|4583EA9A4DF9F9EC054437CFB1C3849EA7BD49FA|ywcB]-[gene|ADB447B0F8EA4F341FA48344AA958E6B98B9EFE4|ywcA]
regulation
expressed during sporulation ([protein|search|SigE]) [Pubmed|15699190]
sigma factors
[protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE]: sigma factor, [Pubmed|15699190], in [regulon|protein:3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE regulon]
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[gene|4583EA9A4DF9F9EC054437CFB1C3849EA7BD49FA|ywcB]→[gene|ADB447B0F8EA4F341FA48344AA958E6B98B9EFE4|ywcA]

2024-09-20 08:02:36

ghost

53

8c255ac1bc7385c6d28b8eadd8dae878261b033b

B1DAD6DB57E088D9E39C46168C020EC6DFB2468D

Biological materials
Mutant
MGNA-B229 (ywcA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1228 NBRP B. subtilis, Japan]
available in [wiki|Erhard Bremer]'s lab [Pubmed|24142252]
BKE38240 ([gene|ADB447B0F8EA4F341FA48344AA958E6B98B9EFE4|ywcA]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE38240 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_AAATAATAAAAAAGCAGTCA,  downstream forward: _UP4_TAAAAAAAGCTCTCTTTATC
BKK38240 ([gene|ADB447B0F8EA4F341FA48344AA958E6B98B9EFE4|ywcA]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK38240 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_AAATAATAAAAAAGCAGTCA,  downstream forward: _UP4_TAAAAAAAGCTCTCTTTATC
References
26060272,15699190,24142252,14563880

ADB447B0F8EA4F341FA48344AA958E6B98B9EFE4

Page visits: 3417

Time of last update: 2024-10-03 16:29:53

Author of last update: Melvin.boenninger