yvaM
168
similar to hydrolase
locus
BSU_33640
Molecular weight
29.43 kDa
pI
8.99
function
unknown
product
unknown
essential
no
synonyms
yvaM
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0596 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,455,472 3,456,242
The protein
Protein family
[wiki|AB hydrolase superfamily] (according to UniProt)
[wiki|Domains]
[wiki|AB hydrolase-1 domain] (aa 22-122) (according to UniProt)
Structure
[PDB|5EGN] (26% identity)
[AF|O32234]
Paralogous protein(s)
[protein|322BE299860795A70EFA78B8E2614CCCC1CE7C87|ydjP], (39,4%)
Expression and Regulation
Operons
genes
[gene|AD4702CC69AC7D5FF391F14176881D582DD1C68A|yvaM]
description
(according to [http://dbtbs.hgc.jp/COG/prom/yvaM.html DBTBS]) null
regulation
repressed by [protein|search|RghR] [Pubmed|16553878]
regulatory mechanism
[protein|972401B6AF56EC67FE6F1C3FEA9E2A9FC77C7672|rghR]: repression, [Pubmed|16553878], in [regulon|protein:972401B6AF56EC67FE6F1C3FEA9E2A9FC77C7672|rghR regulon]
Biological materials
Mutant
MGNA-A447 (yvaM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/447 NBRP B. subtilis, Japan]
BKE33640 ([gene|AD4702CC69AC7D5FF391F14176881D582DD1C68A|yvaM]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE33640 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGCTTTTCTCCTTTGAC, downstream forward: _UP4_TAGGAATAGAAAACGCTTGG
BKK33640 ([gene|AD4702CC69AC7D5FF391F14176881D582DD1C68A|yvaM]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK33640 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGCTTTTCTCCTTTGAC, downstream forward: _UP4_TAGGAATAGAAAACGCTTGG
References
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Time of last update: 2024-10-07 06:19:06
Author of last update: Melvin.boenninger