ydcI
168
similar to RNase
locus
BSU_04780
Molecular weight
81.23 kDa
pI
6.77
function
unknown
product
unknown
essential
no
synonyms
ydcI
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG2183 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
525,743 527,902
The protein
[wiki|Domains]
[wiki|YqgF/RNase H-like domain] (aa 321-446) (according to the Interpro database)
[wiki|S1 domain] (aa 646-718) (according to UniProt)
Structure
[PDB|2OCE] (the protein from Pseudomonas aeruginosa, 43% identity)
[AF|O31489]
Modification
phosphorylated on Arg-473 [Pubmed|22517742]
Expression and Regulation
Operons
genes
[gene|A4DB115D36907DE3EE6F80738E4D777838A3FE7F|ydcI]
description
[Pubmed|22383849]
Biological materials
Mutant
GP3318 (Δ[gene|A4DB115D36907DE3EE6F80738E4D777838A3FE7F|ydcI]::''phleo''), available in [wiki|Jörg Stülke]'s lab
MGNA-C101 (ydcI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2099 NBRP B. subtilis, Japan]
BKE04780 ([gene|A4DB115D36907DE3EE6F80738E4D777838A3FE7F|ydcI]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE04780 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTAACCAAAGCCTCCAA, downstream forward: _UP4_TAAAAGCACTGCTTACGAGC
BKK04780 ([gene|A4DB115D36907DE3EE6F80738E4D777838A3FE7F|ydcI]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK04780 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTAACCAAAGCCTCCAA, downstream forward: _UP4_TAAAAGCACTGCTTACGAGC
References
Page visits: 1990
Time of last update: 2024-12-21 20:15:08
Author of last update: Rica