yugU
168
general stress protein, survival of ethanol and paraquat stresses
locus
BSU_31280
Molecular weight
16.17 kDa
pI
6.59
function
survival of stress conditions
product
unknown
essential
no
synonyms
yugU
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0432 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,213,854 3,214,252
The protein
Protein family
UPF0047 family (single member, according to UniProt)
Structure
[PDB|1VMH] (the protein from ''Clostridium acetobutylicum'', 54% identity, 83% similarity)
[AF|O05243]
Expression and Regulation
Operons
genes
[gene|A4BF42889C55566ACE702561E34109F184413B85|yugU]-[gene|561B400C0255AAC2B52ADBBCA05D373E6366CD40|yuzH]
description
[pubmed|22383849]
regulatory mechanism
[protein|90DCE4F286D2C151D8BDBF0E024E6BBEC94E2397|spoIIID]: repression, [Pubmed|15383836], in [regulon|protein:90DCE4F286D2C151D8BDBF0E024E6BBEC94E2397|spoIIID regulon]
sigma factors
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, [Pubmed|26577401], in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]
[protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE]: sigma factor, [Pubmed|15383836], in [regulon|protein:3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE regulon]
Biological materials
Mutant
MGNA-A616 (yugU::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/616 NBRP B. subtilis, Japan]
BKE31280 ([gene|A4BF42889C55566ACE702561E34109F184413B85|yugU]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE31280 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGTTTCTCCTTTCGTT, downstream forward: _UP4_TAATAGGCTGTTTTTTATGA
BKK31280 ([gene|A4BF42889C55566ACE702561E34109F184413B85|yugU]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK31280 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGTTTCTCCTTTCGTT, downstream forward: _UP4_TAATAGGCTGTTTTTTATGA
References
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Time of last update: 2024-10-11 17:07:00
Author of last update: Melvin.boenninger