yybE
168
similar to transcriptional regulator ([wiki|LysR family])
locus
BSU_40670
Molecular weight
31.26 kDa
pI
7.3
function
unknown
product
transcriptional regulator ([wiki|LysR family])
essential
no
synonyms
yybE
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0583 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
4,180,564 4,181,442
The protein
Protein family
[wiki|LysR family] (according to UniProt)
[wiki|Domains]
[wiki|HTH lysR-type domain] (aa 1-58) (according to UniProt)
Structure
[PDB|4X6G] (OxyR from Pseudomonas aeruginosa, 28% identity) [pubmed|25931525]
[AF|P37499]
Expression and Regulation
Operons
genes
[gene|9EC2800AF5B2B65BE3DEB4ABCCE7E448A24440DF|yybE]-[gene|DBEB1E43E1121D3D8AB6A0CA3BAF4072715F6577|yybD]-[gene|33C3EDF3709AC835C9C50B1B7978BA7C23EC9B9E|yybC]
description
[pubmed|22383849]
Biological materials
Mutant
MGNA-B849 (yybE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1848 NBRP B. subtilis, Japan]
BKE40670 ([gene|9EC2800AF5B2B65BE3DEB4ABCCE7E448A24440DF|yybE]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE40670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTATCATCTCTCCTTAT, downstream forward: _UP4_TTTTCTGAGTAGGAAGGATT
BKK40670 ([gene|9EC2800AF5B2B65BE3DEB4ABCCE7E448A24440DF|yybE]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK40670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTATCATCTCTCCTTAT, downstream forward: _UP4_TTTTCTGAGTAGGAAGGATT
References
Research papers
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Time of last update: 2025-04-06 00:25:08
Author of last update: Melvin.boenninger