yumB
168
similar to type II NADH dehydrogenase (non proton-pumping)
locus
BSU_32100
Molecular weight
44.77 kDa
pI
6.62
function
unknown
product
unknown
essential
no
synonyms
yumB
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1252 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,300,034 3,301,254
The protein
Protein family
NADH dehydrogenase family (with [protein|5044FDBEC8D81D1978DB431F9222902FCD80DD2D|yutJ] and [protein|56F407D408272F3674612C9CDFE4A922680EC694|ndh], according to UniProt)
[wiki|Cofactors]
FAD (according to UniProt)
Structure
[PDB|4NWZ] (from Caldalkalibacillus thermarum, 62% identity) [pubmed|24444429]
[AF|O05267]
Paralogous protein(s)
[protein|56F407D408272F3674612C9CDFE4A922680EC694|ndh]
Expression and Regulation
Operons
genes
[gene|9B3E9074975758BCB3D06820E4A35F8C2B78DCEB|yumB]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-B571 (yumB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1570 NBRP B. subtilis, Japan]
BKE32100 ([gene|9B3E9074975758BCB3D06820E4A35F8C2B78DCEB|yumB]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE32100 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCACATCCACCTTCTCTT, downstream forward: _UP4_TAAAAACCCGCGGAAGCGGG
BKK32100 ([gene|9B3E9074975758BCB3D06820E4A35F8C2B78DCEB|yumB]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK32100 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCACATCCACCTTCTCTT, downstream forward: _UP4_TAAAAACCCGCGGAAGCGGG
References
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Time of last update: 2024-10-11 22:32:50
Author of last update: Melvin.boenninger