yxaB

yxaB
168

general stress protein, similar to pyruvyl transferase

locus
BSU_40030
Molecular weight
39.61 kDa
pI
4.53
Protein length
Gene length
function
biofilm formation, survival of salt and ethanol stress
product
putative exopolysaccaride synthase
essential
no
synonyms
yxaB

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG5039 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
4,110,949  4,111,980
The protein
Protein family
polysaccharide pyruvyl transferase family (with [protein|6EBD8F7065B6C1996067F3120DD9CFEA91D3A444|epsI] and [protein|52A47B49B1FB955EE7E3C316B57A2B4134F78480|epsO], according to UniProt)
Structure
[PDB|5AX7] (from yeast, 30% identity) [pubmed|27194449]
[AF|P42101]
Paralogous protein(s)
[protein|6EBD8F7065B6C1996067F3120DD9CFEA91D3A444|epsI]
Expression and Regulation
Operons
genes
[gene|4907D4585491349E2592B0EF9150312A80785EE5|yxaA]-[gene|9A223AE85131511B7EA3A71EA57D87E8B167FA67|yxaB]
description
[Pubmed|15805528,10746760]
regulation
induced by stress ([protein|search|SigB]) [Pubmed|15805528]
regulatory mechanism
[protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]: repression, [Pubmed|15805528,18326573], in [regulon|protein:E5110D9C36E8C55AFD1419987B14A53232165F20|abrB regulon]
sigma factors
[protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA]: sigma factor, [Pubmed|15805528], in [regulon|protein:360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA regulon]
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, [Pubmed|15805528], in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]
Open in new tab

[gene|4907D4585491349E2592B0EF9150312A80785EE5|yxaA]→[gene|9A223AE85131511B7EA3A71EA57D87E8B167FA67|yxaB]

2024-09-05 18:48:06

ghost

72

792b75318dc51d14509b206375aae633f110e1d3

6E63188162F8D54959B033216EA6A82BAA2419C1

genes
[gene|9A223AE85131511B7EA3A71EA57D87E8B167FA67|yxaB]
description
[Pubmed|15805528]
regulation
induced by stress ([protein|search|SigB]) [Pubmed|15805528]
Open in new tab

[gene|9A223AE85131511B7EA3A71EA57D87E8B167FA67|yxaB]

2024-09-04 21:00:34

ghost

64

85b569a4b24c9e6c86a6a01384647691249877d5

B7F02EEADC01FE7641F0F041113BD5485279C448

Biological materials
Mutant
MGNA-B681 (yxaB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1680 NBRP B. subtilis, Japan]
BKE40030 ([gene|9A223AE85131511B7EA3A71EA57D87E8B167FA67|yxaB]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE40030 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATATCTGCGTCCTCCTTCT,  downstream forward: _UP4_TAAACGAAAAAGACTGCCCT
BKK40030 ([gene|9A223AE85131511B7EA3A71EA57D87E8B167FA67|yxaB]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK40030 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATATCTGCGTCCTCCTTCT,  downstream forward: _UP4_TAAACGAAAAAGACTGCCCT
References
10746760,15805528,27194449

9A223AE85131511B7EA3A71EA57D87E8B167FA67

Page visits: 2580

Time of last update: 2024-10-10 16:36:11

Author of last update: Melvin.boenninger