yokL

yokL
168

similar to spermidine/spermine N-acetyltransferase

locus
BSU_21550
Molecular weight
20.71 kDa
pI
4.78
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
yokL

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1670 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,273,989  2,274,522
The protein
Protein family
[wiki|Acetyltransferase family] (according to UniProt)
[wiki|Domains]
[wiki|N-acetyltransferase domain] (aa 11-170) (according to UniProt)
Structure
[PDB|6DAU] (SpeG from Vibrio cholerae, 27% identity)
[AF|O31995]
Expression and Regulation
Operons
genes
[gene|13C081250872E72C61C49D8F77AC5AF4B6D431A3|yokI]-[gene|9BC2309D7FC93CD4195849BFCF195ED3EBC3CAF1|yokJ]-[gene|8BA8DB1483190AB847F28F3E56C247FE85C3225E|yokK]-[gene|9A03964C94A9253B3D9AAA60ACA0651AED49A627|yokL]
description
[Pubmed|20817675]
regulatory mechanism
[protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]: repression, [Pubmed|20817675], in [regulon|protein:E5110D9C36E8C55AFD1419987B14A53232165F20|abrB regulon]
additional information
A [protein|search|ncRNA] is predicted between '[protein|search|yolA]' and '[protein|search|yokL]' [PubMed|20525796]
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[gene|13C081250872E72C61C49D8F77AC5AF4B6D431A3|yokI]→[gene|9A03964C94A9253B3D9AAA60ACA0651AED49A627|yokL]

2024-10-12 10:03:27

ghost

91

c0991145616d1ecd9ca254c77d6417772671b6cd

0031AF5FF8A7ECE1B60F8B6A925BF05711BF39E6

Biological materials
Mutant
BKE21550 ([gene|9A03964C94A9253B3D9AAA60ACA0651AED49A627|yokL]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE21550 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTTAACTTTCCCTCCAG,  downstream forward: _UP4_TAATATCACTTGTGCATCGA
BKK21550 ([gene|9A03964C94A9253B3D9AAA60ACA0651AED49A627|yokL]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK21550 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTTAACTTTCCCTCCAG,  downstream forward: _UP4_TAATATCACTTGTGCATCGA
References
20525796,20817675

9A03964C94A9253B3D9AAA60ACA0651AED49A627

Page visits: 2368

Time of last update: 2024-10-15 08:45:11

Author of last update: Melvin.boenninger