yknZ

yknZ
168

[wiki|ABC transporter] (permease) for the export of the [protein|820635420B3980B620F3E3D7ACF7EDE9DC6275AD|sdpC] toxin

locus
BSU_14370
Molecular weight
41.96 kDa
pI
4.68
Protein length
Gene length
function
resistence against [protein|820635420B3980B620F3E3D7ACF7EDE9DC6275AD|sdpC] toxin
product
[wiki|ABC transporter] (permease)
essential
no
synonyms
yknZ

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0577 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,506,105  1,507,298
The protein
Protein family
[wiki|ABC-4 integral membrane protein family] (according to UniProt)
Structure
[PDB|5WS4] (from Acinetobacter baumanni, 38% identity) [pubmed|29109439]
[AF|O31712]
Paralogous protein(s)
[protein|5AEDC5B857537B7D2A2637C0BC5BE78FD09A66B3|yvrN]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|70D7098BEBD5E53B4B9B8C3394FAAF972C65EE22|yknU]-[gene|C6B0ACB9D9703DD8141FD7D9D62DB22FB48F458B|yknV]-[gene|916419C4ED113778488EBC558A35810498028B02|yknW]-[gene|FD270195901B89DAAAD134DB9DE729670A9BDECF|yknX]-[gene|FE3A01BEA974C5E32C68DC600C800E5EF101B34F|yknY]-[gene|9680326BAA94A503E2A5C6F0A2479AE0B0467B4C|yknZ]
description
[Pubmed|22383849]
Open in new tab

[gene|70D7098BEBD5E53B4B9B8C3394FAAF972C65EE22|yknU]→[gene|9680326BAA94A503E2A5C6F0A2479AE0B0467B4C|yknZ]

2024-12-30 14:39:57

Jstuelk

117

974e58c669e1cd698f882bd9e9cd9cf65b440ca0

2DDBCA4C4ACA22DB6536DC6ACAC265E497334729

genes
[gene|916419C4ED113778488EBC558A35810498028B02|yknW]-[gene|FD270195901B89DAAAD134DB9DE729670A9BDECF|yknX]-[gene|FE3A01BEA974C5E32C68DC600C800E5EF101B34F|yknY]-[gene|9680326BAA94A503E2A5C6F0A2479AE0B0467B4C|yknZ]
description
[Pubmed|9987136]
regulation
repressed during logrithmic growth ([protein|search|AbrB]) [Pubmed|12076816]
regulatory mechanism
[protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]: repression, [Pubmed|12076816], in [regulon|protein:E5110D9C36E8C55AFD1419987B14A53232165F20|abrB regulon]
sigma factors
[protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|sigW]: sigma factor, [Pubmed|9987136], in [regulon|protein:3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|sigW regulon]
Open in new tab

[gene|916419C4ED113778488EBC558A35810498028B02|yknW]→[gene|9680326BAA94A503E2A5C6F0A2479AE0B0467B4C|yknZ]

2024-12-30 14:38:31

ghost

108

8e304f408425d6f34ae03472458263e5418cf4c1

6245A3EE9A735006B93C2157E2EB2D4ED6006306

Biological materials
Mutant
MGNA-B351 (yknZ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1350 NBRP B. subtilis, Japan]
BKE14370 ([gene|9680326BAA94A503E2A5C6F0A2479AE0B0467B4C|yknZ]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE14370 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTCTGATGTTTTCCAACA,  downstream forward: _UP4_TAGCCTCATGCAACATGCAT
BKK14370 ([gene|9680326BAA94A503E2A5C6F0A2479AE0B0467B4C|yknZ]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK14370 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTCTGATGTTTTCCAACA,  downstream forward: _UP4_TAGCCTCATGCAACATGCAT
References
10092453,16629676,9987136,12076816,29109439,39397791

9680326BAA94A503E2A5C6F0A2479AE0B0467B4C

Page visits: 4047

Time of last update: 2024-12-30 13:31:59

Author of last update: Jstuelk