yjdI
168
similiar to Cys-tRNA(Pro) and Cys-tRNA(Cys) deacylase
locus
BSU_12060
Molecular weight
17.12 kDa
pI
8.76
function
maturation of tRNA
product
Cys-tRNA(Pro) and Cys-tRNA(Cys) deacylase
essential
no
synonyms
yjdI
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG2606 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
1,277,686 1,278,165
The protein
Protein family
prolyl-tRNA editing family (single member, according to UniProt)
Structure
[PDB|2DXA] (from E. coli, 44% identity)
[AF|O31650]
Expression and Regulation
Operons
genes
[gene|95AAF457B155A56DBD63D0AAB7C986AFBEC5ADEF|yjdI]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-A257 (yjdI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/257 NBRP B. subtilis, Japan]
BKE12060 ([gene|95AAF457B155A56DBD63D0AAB7C986AFBEC5ADEF|yjdI]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE12060 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGTTTTCACCCACTATC, downstream forward: _UP4_TAGATGCAGATATAGGGGAA
BKK12060 ([gene|95AAF457B155A56DBD63D0AAB7C986AFBEC5ADEF|yjdI]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK12060 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGTTTTCACCCACTATC, downstream forward: _UP4_TAGATGCAGATATAGGGGAA
References
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Time of last update: 2024-10-01 14:42:19
Author of last update: Melvin.boenninger