csbD

csbD
168

general stress protein

locus
BSU_36670
Molecular weight
6.66 kDa
pI
9.69
Protein length
62 aaSequenceBlast
Gene length
189 bpSequenceBlast
function
survival of salt stress and at low temperatures
product
unknown
essential
no
ec
null
synonyms
csbD, ywmG
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG3237 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,770,104  3,770,292
The protein
Protein family
UPF0337 (CsbD) family (single member, according to UniProt)
Structure
[AF|P70964]
Expression and Regulation
Operons
genes
[gene|958B606BFE4C3A3E1A48787A8F427CCCDCB65422|csbD]
description
[Pubmed|10376822]
regulation
''csbD'': induced by stress ([protein|search|SigB]) [Pubmed|10376822,15805528]
sigma factors
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, [Pubmed|10376822,15805528], in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]
Open in new tab

[gene|958B606BFE4C3A3E1A48787A8F427CCCDCB65422|csbD]

2024-12-16 19:54:57

ghost

53

4e0cabfb1680102ea74a7b5b092379c1d413aa20

BEA9976667E7A1B0E735849B1839166780D49FA1

genes
[gene|F775A9E74554ECBB7DD6F905FB95D67B848CBF21|ywmF]-[gene|958B606BFE4C3A3E1A48787A8F427CCCDCB65422|csbD]
description
[Pubmed|10376822]
regulation
''csbD'': induced by stress ([protein|search|SigB]) [Pubmed|10376822,15805528]
sigma factors
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]
Open in new tab

[gene|F775A9E74554ECBB7DD6F905FB95D67B848CBF21|ywmF]→[gene|958B606BFE4C3A3E1A48787A8F427CCCDCB65422|csbD]

2024-12-21 12:22:46

ghost

49

999f62d6f9377a6ee4d80e905d462b3c768044a9

F2BDD7759022070884FAA230B955408E23EE3CA7

Biological materials
Mutant
MGNA-A194 (ywmG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/194 NBRP B. subtilis, Japan]
BKE36670 ([gene|958B606BFE4C3A3E1A48787A8F427CCCDCB65422|csbD]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE36670 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTTAATTCTCCCCTCTC,  downstream forward: _UP4_TAATCGTACGGAAGAGGCAG
BKK36670 ([gene|958B606BFE4C3A3E1A48787A8F427CCCDCB65422|csbD]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK36670 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTTAATTCTCCCCTCTC,  downstream forward: _UP4_TAATCGTACGGAAGAGGCAG
References
10376822,15805528

958B606BFE4C3A3E1A48787A8F427CCCDCB65422

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Time of last update: 2024-12-22 07:16:28

Author of last update: Melvin.boenninger