yvpB
168
similar to peptidase
locus
BSU_34940
Molecular weight
27.36 kDa
pI
8.3
function
unknown
product
unknown
essential
no
synonyms
yvpB
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG4990 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,589,611 3,590,363
Phenotypes of a mutant
defective in [category|SW.4.1.4|Swarming] motility (periodic cessation and reinitiation of [category|SW.4.1.4|Swarming] motility, terracing colonies) [pubmed|35638827]
The protein
Structure
[PDB|3ERV] (from B. anthracis, corresponds to aa 73 ... 246, 49% identity)
[AF|O34735]
Expression and Regulation
Operons
genes
[gene|950D355D993DF79AD5288A00AA04A775637AC04D|yvpB]-[gene|99ECA1B305145A63BD3A72094EF24F56D875BCC1|pelC]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-A383 (yvpB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/383 NBRP B. subtilis, Japan]
BKE34940 ([gene|950D355D993DF79AD5288A00AA04A775637AC04D|yvpB]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE34940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTATCTCCTTGTTCT, downstream forward: _UP4_TAAACACCTGAAGCCTCACT
BKK34940 ([gene|950D355D993DF79AD5288A00AA04A775637AC04D|yvpB]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK34940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTATCTCCTTGTTCT, downstream forward: _UP4_TAAACACCTGAAGCCTCACT
Original Publications
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Time of last update: 2025-03-31 15:14:45
Author of last update: Jstuelk