ydjH
168
required for membrane localization of [protein|CA4EF8385EAA4BBC47FF0D998C820D9F36F5F94D|ydjI] and [protein|3B6F4FBB19401069E827EAF5835DD15AAA3C3487|pspA] upon stress
locus
BSU_06200
Molecular weight
28.01 kDa
pI
5.93
function
targeting of [protein|3B6F4FBB19401069E827EAF5835DD15AAA3C3487|pspA]
product
unknown
essential
no
ec
null
synonyms
ydjH
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1512 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
673,019 673,783
Phenotypes of a mutant
strong defect in cell morphology upon alkali stress [pubmed|34777311]
The protein
Protein family
UPF0603 family (single member, according to UniProt)
Structure
[AF|O35004]
[wiki|Localization]
cell membrane [pubmed|34777311]
Expression and Regulation
Operons
genes
[gene|3B6F4FBB19401069E827EAF5835DD15AAA3C3487|pspA]-[gene|F93381205C61665820D034A384BD60410AAE84C1|ydjG]-[gene|938B55332DFB2B465D0D5AD530550CED5AC30A92|ydjH]-[gene|CA4EF8385EAA4BBC47FF0D998C820D9F36F5F94D|ydjI]
description
[Pubmed|11454200]
regulation
induced by alkaline shock ([protein|search|SigW]) [Pubmed|11454200]
regulatory mechanism
[protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]: repression, [Pubmed|18840696,20817675], in [regulon|protein:E5110D9C36E8C55AFD1419987B14A53232165F20|abrB regulon]
sigma factors
[protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|sigW]: sigma factor, [Pubmed|11454200], in [regulon|protein:3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|sigW regulon]
Biological materials
Mutant
MGNA-C215 (ydjH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2213 NBRP B. subtilis, Japan]
BKE06200 ([gene|938B55332DFB2B465D0D5AD530550CED5AC30A92|ydjH]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE06200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CGCTTTCCCAAAAAATCCAC, downstream forward: _UP4_TAAATGTAAGAAATAGAGAA
BKK06200 ([gene|938B55332DFB2B465D0D5AD530550CED5AC30A92|ydjH]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK06200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CGCTTTCCCAAAAAATCCAC, downstream forward: _UP4_TAAATGTAAGAAATAGAGAA
References
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Time of last update: 2024-12-30 13:20:05
Author of last update: Jstuelk