ylbB
168
putative oxidoreductase
locus
BSU_14950
Molecular weight
16.21 kDa
pI
4.76
function
unknown
product
unknown
essential
no
synonyms
ylbB
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG2905 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
1,565,849 1,566,295
The protein
[wiki|Domains]
2 [wiki|CBS domain]s (aa 8-68, aa 74-130) (according to UniProt)
Structure
[PDB|4FRY] (protein from ''Burkholderia ambifaria'', 38% identity) [Pubmed|23382856]
[AF|O34682]
Paralogous protein(s)
[protein|AF3ED8916EA02A560EC8D47E4B1C911E871B9AB0|yhcV], (40%)
Expression and Regulation
Operons
genes
[gene|8529D83560E934709B20CCF0B72251A74EC272BB|ylbB]-[gene|2EC813B89149AD39405E66C325FB2684B5987162|ylbC]
description
[Pubmed|16497325]
regulation
expressed during sporulation in the forespore ([protein|search|SigF]) [Pubmed|16497325,15699190]
sigma factors
[protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|sigF]: sigma factor, [Pubmed|16497325,15699190], in [regulon|protein:CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|sigF regulon]
Biological materials
Mutant
MGNA-B242 (ylbB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1241 NBRP B. subtilis, Japan]
BKE14950 ([gene|8529D83560E934709B20CCF0B72251A74EC272BB|ylbB]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE14950 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCGTTTAACCTCCTTTA, downstream forward: _UP4_TAACACATAAATCTTTGACA
BKK14950 ([gene|8529D83560E934709B20CCF0B72251A74EC272BB|ylbB]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK14950 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCGTTTAACCTCCTTTA, downstream forward: _UP4_TAACACATAAATCTTTGACA
Expression vectors
pGP2934 (N-terminal His-tag, purification from ''E. coli'', in [wiki|pWH844]), available in [wiki|Jörg Stülke]'s lab
References
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Time of last update: 2024-12-30 11:05:32
Author of last update: Jstuelk