ypdP
168
S protein of queuosine precursor (7-cyano-7-deazaguanine) [wiki|ECF transporter]
locus
BSU_21980
Molecular weight
25.52 kDa
pI
8.69
function
queuosine precursor uptake
product
S protein of queuosine precursor [wiki|ECF transporter]
essential
no
synonyms
ypdP
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1738 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
2,309,730 2,310,419
Phenotypes of a mutant
the mutant tends to acquire suppressor mutations that result in improved growth [Pubmed|28189581]
The protein
Catalyzed reaction/ biological activity
uptake of 7-cyano-7-deazaguanine [pubmed|28208705]
Protein family
vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family (with [protein|9685A380F95F1A73A693B53E4D35A1CB51043FEC|thiT] and [protein|97573C2D4FD8BE6B4C749C0644D053C9A0CBFFF3|trpP], according to UniProt)
Structure
[AF|P54163]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|7DD4BB8222B2EFE81C32C5521A29256095B9D6C1|ypdP]-[gene|09343BE8357AB24C79B69816FAE65D161E668F01|ypdQ]
description
[Pubmed|22383849]
Biological materials
Mutant
GP4790 (trpC2 Δ[gene|7DD4BB8222B2EFE81C32C5521A29256095B9D6C1|ypdP]::neo), available in [wiki|Jörg Stülke]'s lab
MGNA-A872 (ypdP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/872 NBRP B. subtilis, Japan]
BKE21980 ([gene|7DD4BB8222B2EFE81C32C5521A29256095B9D6C1|ypdP]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE21980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGATGAAAAAGCTTCCTT, downstream forward: _UP4_CCTAATGATGAAAGGAGTTC
BKK21980 ([gene|7DD4BB8222B2EFE81C32C5521A29256095B9D6C1|ypdP]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK21980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGATGAAAAAGCTTCCTT, downstream forward: _UP4_CCTAATGATGAAAGGAGTTC
References
Page visits: 1896
Time of last update: 2024-11-14 00:39:11
Author of last update: Robert.warneke