swsB

swsB
168

similar to deacetylase, required for efficient degradation of the spore cortex by [protein|49ED84B48CEC09493B6056D03D2A57578770CE15|cwlJ] during [wiki|germination]

locus
BSU_16700
Molecular weight
36.31 kDa
pI
9.36
Protein length
Gene length
function
required for spore cortex degradation during [wiki|germination]
product
unknown
essential
no
synonyms
swsB, ylxY, ymxI

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0726 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,741,618  1,742,577
The protein
Protein family
[wiki|polysaccharide deacetylase family] (according to UniProt)
[wiki|Domains]
[wiki|NodB homology domain] (aa 130-306) (according to UniProt)
Structure
[PDB|1W17] ([protein|88E167795BBCB8529E322E3A4DC9965EA6AAA617|pdaA], corresponds to aa 120 ... 317, 31% identity) [pubmed|15251431]
[AF|P50850]
Biological materials
Mutant
BKE16700 ([gene|77C3C4ADCBD38EEA99C44850CAEB310C59B6C938|swsB]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE16700 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTTCTGTCCCCCCCTCA,  downstream forward: _UP4_TAACAGATGAAGGCAGCTTG
BKK16700 ([gene|77C3C4ADCBD38EEA99C44850CAEB310C59B6C938|swsB]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK16700 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTTCTGTCCCCCCCTCA,  downstream forward: _UP4_TAACAGATGAAGGCAGCTTG
References
23123912,15251431,31871031

77C3C4ADCBD38EEA99C44850CAEB310C59B6C938

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Time of last update: 2024-10-11 19:30:25

Author of last update: Jstuelk