yonR

yonR
168

lysogenic repressor of [wiki|SP-beta prophage] ([wiki|Xre family])

locus
BSU_21020
Molecular weight
12.23 kDa
pI
5.6
Protein length
Gene length
function
repression of [wiki|SP-beta prophage] genes during lysogenic growth
product
lysogenic repressor of [wiki|SP-beta prophage]
essential
no
synonyms
yonR

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1396 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,221,061  2,221,387
The protein
Protein family
[wiki|Xre family]
[wiki|Domains]
[wiki|HTH cro/C1-type domain] (aa 6-60) (according to UniProt)
Structure
[AF|O31943]
Paralogous protein(s)
[protein|846161AE54F170075F2B2133A8D56FE39A5AF8D9|sknR]
Expression and Regulation
Operons
genes
[gene|71012848B12CB7BCDEEACDAC6AD1966A971F8FAB|yonR]-[gene|8FAC496D7A28DA74A7F866AF24C842F733EE20BE|yonS]
description
[Pubmed|29794222]
regulation
the mRNA is processed between [gene|71012848B12CB7BCDEEACDAC6AD1966A971F8FAB|yonR] and [gene|8FAC496D7A28DA74A7F866AF24C842F733EE20BE|yonS] by [protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y], this requires the [protein|EE52DFA35B935E551871D079A9BE877DB2001A3B|ricA]-[protein|6C9A092F38739A3759793EF8B496569CD02C2E3F|ricF]-[protein|EBD15C174A03B7FCDFFE4C5DB5D86E93F1B9CAC4|ricT] complex [Pubmed|29794222]
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[gene|71012848B12CB7BCDEEACDAC6AD1966A971F8FAB|yonR]→[gene|8FAC496D7A28DA74A7F866AF24C842F733EE20BE|yonS]

2024-10-10 20:54:07

Jstuelk

54

7dc7daab644fa6551bf9dd6bcd9b42ef9fe4c4f1

017651049C415E90D2CCCC3DD09BE0564670D070

Biological materials
Mutant
BKE21020 ([gene|71012848B12CB7BCDEEACDAC6AD1966A971F8FAB|yonR]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE21020 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATAGTAGGTTCCTCACTTT,  downstream forward: _UP4_TAGTAGCTATTCTTAATTCT
BKK21020 ([gene|71012848B12CB7BCDEEACDAC6AD1966A971F8FAB|yonR]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK21020 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATAGTAGGTTCCTCACTTT,  downstream forward: _UP4_TAGTAGCTATTCTTAATTCT
References
23504016,29794222,10376821

71012848B12CB7BCDEEACDAC6AD1966A971F8FAB

Page visits: 3594

Time of last update: 2024-10-15 17:01:23

Author of last update: Jstuelk