yonR
168
lysogenic repressor of [wiki|SP-beta prophage] ([wiki|Xre family])
locus
BSU_21020
Molecular weight
12.23 kDa
pI
5.6
function
repression of [wiki|SP-beta prophage] genes during lysogenic growth
product
lysogenic repressor of [wiki|SP-beta prophage]
essential
no
synonyms
yonR
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1396 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
2,221,061 2,221,387
The protein
Protein family
[wiki|Xre family]
[wiki|Domains]
[wiki|HTH cro/C1-type domain] (aa 6-60) (according to UniProt)
Structure
[AF|O31943]
Paralogous protein(s)
[protein|846161AE54F170075F2B2133A8D56FE39A5AF8D9|sknR]
Expression and Regulation
Operons
genes
[gene|71012848B12CB7BCDEEACDAC6AD1966A971F8FAB|yonR]-[gene|8FAC496D7A28DA74A7F866AF24C842F733EE20BE|yonS]
description
[Pubmed|29794222]
regulation
the mRNA is processed between [gene|71012848B12CB7BCDEEACDAC6AD1966A971F8FAB|yonR] and [gene|8FAC496D7A28DA74A7F866AF24C842F733EE20BE|yonS] by [protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y], this requires the [protein|EE52DFA35B935E551871D079A9BE877DB2001A3B|ricA]-[protein|6C9A092F38739A3759793EF8B496569CD02C2E3F|ricF]-[protein|EBD15C174A03B7FCDFFE4C5DB5D86E93F1B9CAC4|ricT] complex [Pubmed|29794222]
Biological materials
Mutant
BKE21020 ([gene|71012848B12CB7BCDEEACDAC6AD1966A971F8FAB|yonR]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE21020 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGTAGGTTCCTCACTTT, downstream forward: _UP4_TAGTAGCTATTCTTAATTCT
BKK21020 ([gene|71012848B12CB7BCDEEACDAC6AD1966A971F8FAB|yonR]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK21020 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGTAGGTTCCTCACTTT, downstream forward: _UP4_TAGTAGCTATTCTTAATTCT
References
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Time of last update: 2024-12-21 22:50:41
Author of last update: Jstuelk