yrhH
168
similar to methyltransferase
locus
BSU_27180
Molecular weight
20.99 kDa
pI
10.16
function
unknown
product
unknown
essential
no
synonyms
yrhH
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG2226 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
2,777,877 2,778,419
The protein
Protein family
[wiki|Methyltransferase superfamily] (according to UniProt)
Structure
[AF|O05400]
Expression and Regulation
Operons
genes
[gene|6D5089931FBDB398A7FAF3C8DDF341EB4949AEFE|yrhH]
description
[Pubmed|9683469]
regulation
Expressed under stress conditions ([protein|search|SigW], [protein|search|SigX]) [Pubmed|9683469]
sigma factors
[protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|sigW]: sigma factor, [Pubmed|9683469], in [regulon|protein:3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|sigW regulon]
[protein|081DF3EE9FA56209D648C7677188C61CE3AA8E41|sigM]: sigma factor, [Pubmed|18179421], in [regulon|protein:081DF3EE9FA56209D648C7677188C61CE3AA8E41|sigM regulon]
[protein|E77364F274A520FCCA9F5C9504E317B047BA29E6|sigX]: sigma factor, [Pubmed|9683469], in [regulon|protein:E77364F274A520FCCA9F5C9504E317B047BA29E6|sigX regulon]
additional information
the mRNA is substantially stabilized upon depletion of [gene|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y] [PubMed|21815947]
genes
[gene|6D5089931FBDB398A7FAF3C8DDF341EB4949AEFE|yrhH]-[gene|3DA3FFB295F5513A220CB163994EE0F356C810E6|fatR]-[gene|4BA5214C441C6671CB7DAA3CACBCA5FC025BE0E6|yrhJ]
description
[Pubmed|18179421]
regulation
Expressed under stress conditions ([protein|search|SigW], [protein|search|SigX]) [Pubmed|9683469]
additional information
A [protein|search|ncRNA] ([wiki|RnaC]) is encoded between '[protein|search|yrhK]' and '[protein|search|yrhJ]' [PubMed|25790031]
Biological materials
Mutant
BKE27180 ([gene|6D5089931FBDB398A7FAF3C8DDF341EB4949AEFE|yrhH]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE27180 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTAAACACCTGCTTTT, downstream forward: _UP4_TAAAAAATTTCTCGGGAAAT
BKK27180 ([gene|6D5089931FBDB398A7FAF3C8DDF341EB4949AEFE|yrhH]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK27180 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTAAACACCTGCTTTT, downstream forward: _UP4_TAAAAAATTTCTCGGGAAAT
References
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Time of last update: 2024-12-05 18:49:35
Author of last update: Jstuelk