ytzG

ytzG
168

similar to 16S pseudouridylate synthase

locus
BSU_30035
Molecular weight
27.00 kDa
pI
5.619
Protein length
Gene length
function
16S rRNA modification
product
putative 16S pseudouridylate synthase
essential
no
ec
5.4.99.19
synonyms
ytzG, ytzF

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1187 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,072,743  3,073,462
The protein
Catalyzed reaction/ biological activity
uridine516 in 16S rRNA --> a pseudouridine516 in 16S rRNA (according to E. coli RsuA)
Protein family
[wiki|S4 RNA-binding domain] superfamily (according to http://www.ebi.ac.uk/interpro/entry/IPR036986 Interpro)
pseudouridine synthase RsuA family (with [protein|5CD1E266B0EC82546A2AF19A05490DD4D04F812C|rluB], according to UniProt)
[wiki|Domains]
[wiki|S4 RNA-binding domain] (aa 1-65) (according to UniProt)
Structure
[PDB|1KSK] (RsuA from E. coli, 40% identical) [pubmed|11953756]
[AF|O32068]
Expression and Regulation
Operons
genes
[gene|0AFFB4B715CCE6B1C53BBB7F890EFB3126CB466E|murJ]-[gene|69052B24B577ABA4B20E610F679154DC97EFD8DE|ytzG]
description
[Pubmed|22383849]
Open in new tab

[gene|0AFFB4B715CCE6B1C53BBB7F890EFB3126CB466E|murJ]→[gene|69052B24B577ABA4B20E610F679154DC97EFD8DE|ytzG]

2024-10-03 15:53:24

Jstuelk

87

83d4ff96c0f28ad4450fc83611d635576aa14340

E9E6693CCC530C8F6C0BB625C5B08E91736B92E3

Biological materials
Mutant
BKE30035 ([gene|69052B24B577ABA4B20E610F679154DC97EFD8DE|ytzG]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE30035 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTCCCAATCTCTCCTTTA,  downstream forward: _UP4_TGACAAAAACCCCGCATACC
BKK30035 ([gene|69052B24B577ABA4B20E610F679154DC97EFD8DE|ytzG]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK30035 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTCCCAATCTCTCCTTTA,  downstream forward: _UP4_TGACAAAAACCCCGCATACC
References
Research papers
11953756

69052B24B577ABA4B20E610F679154DC97EFD8DE

Page visits: 1891

Time of last update: 2024-10-07 16:00:51

Author of last update: Melvin.boenninger