ywjB
168
unknown
locus
BSU_37220
Molecular weight
19.44 kDa
pI
4.53
function
unknown
product
unknown
essential
no
synonyms
ywjB
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0262 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,819,220 3,819,744
The protein
Structure
[PDB|2GD9] ([protein|E2CABD337831904871E0F0260DAA992E41A4F9E0|yyaP], 31% identity)
[AF|P45862]
Paralogous protein(s)
[protein|E2CABD337831904871E0F0260DAA992E41A4F9E0|yyaP]
[wiki|Localization]
membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|07752EC6940F43DEBD1E9313A2A195E35EDB9F69|ywiE]-[gene|D5A3C316BD4567A0155F70330E32ACDE18F063FE|ywjA]-[gene|685B58AD2A02A0B48B7D4AAAE046DE2CF8F77C58|ywjB]
description
[pubmed|22383849]
regulatory mechanism
[protein|F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur]: repression, [pubmed|12354229], in [regulon|protein:F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur regulon]
sigma factors
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, [Pubmed|26577401], in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]
genes
[gene|D5A3C316BD4567A0155F70330E32ACDE18F063FE|ywjA]-[gene|685B58AD2A02A0B48B7D4AAAE046DE2CF8F77C58|ywjB]
description
[pubmed|22383849]
genes
[gene|685B58AD2A02A0B48B7D4AAAE046DE2CF8F77C58|ywjB]
description
[Pubmed|9353933]
regulation
repressed unless the cells enter an iron starvation ([protein|search|Fur]) [Pubmed|12354229]
regulatory mechanism
[protein|F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur]: repression, [pubmed|12354229], in [regulon|protein:F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur regulon]
Biological materials
Mutant
MGNA-B661 (ywjB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1660 NBRP B. subtilis, Japan]
BKE37220 ([gene|685B58AD2A02A0B48B7D4AAAE046DE2CF8F77C58|ywjB]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE37220 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTCTCCTCCTATCGAT, downstream forward: _UP4_TAAGAAAAAGGATAGACAGA
BKK37220 ([gene|685B58AD2A02A0B48B7D4AAAE046DE2CF8F77C58|ywjB]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK37220 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTCTCCTCCTATCGAT, downstream forward: _UP4_TAAGAAAAAGGATAGACAGA
References
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Time of last update: 2024-10-06 00:57:45
Author of last update: Melvin.boenninger