ydhF
168
unknown
locus
BSU_05730
Molecular weight
26.38 kDa
pI
6.16
function
unknown
product
unknown
essential
no
synonyms
ydhF
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms
This gene is a member of the following regulons
Gene
Coordinates
619,321 620,031
The protein
[wiki|Domains]
[wiki|DUF4352] (aa 84 ... 190) (according to UniProt)
Structure
[AF|O05497]
[wiki|Localization]
extracellular (signal peptide) [Pubmed|18957862], lipid modification as retention signal
Expression and Regulation
Operons
genes
[gene|3B95AB3021280215B6B487A348D78FB5797AEEA6|phoB]-[gene|66D3E978E3DBA0410CA5597B5B860DF27C97335A|ydhF]
description
[Pubmed|10913081]
regulation
expressed under conditions of phosphate limitation ([protein|search|PhoP]) [Pubmed|9335276,10913081,16030210]
regulatory mechanism
[protein|638D6D2FCCA2A167EFED05CB4E60C2D78D5319AE|phoP]: activation, [Pubmed|9335276,10913081,16030210], in [regulon|protein:638D6D2FCCA2A167EFED05CB4E60C2D78D5319AE|phoP regulon]
sigma factors
[protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE]: sigma factor, [Pubmed|15699190,16030210], in [regulon|protein:3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE regulon]
[protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA]: sigma factor, in [regulon|protein:360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA regulon]
Biological materials
Mutant
MGNA-C181 (ydhF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2179 NBRP B. subtilis, Japan]
BKE05730 ([gene|66D3E978E3DBA0410CA5597B5B860DF27C97335A|ydhF]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE05730 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATGATTCCTCCATTAA, downstream forward: _UP4_TAAATCAAGAACTCCCGTAC
BKK05730 ([gene|66D3E978E3DBA0410CA5597B5B860DF27C97335A|ydhF]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK05730 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATGATTCCTCCATTAA, downstream forward: _UP4_TAAATCAAGAACTCCCGTAC
References
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Time of last update: 2024-12-19 21:50:17
Author of last update: Jstuelk