yfmS

yfmS
168

soluble chemotaxis receptor

locus
BSU_07360
Molecular weight
30.17 kDa
pI
4.53
Protein length
Gene length
function
control of chemotaxis
product
soluble chemotaxis receptor
essential
no
ec
null
synonyms
yfmS

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0840 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
808,562  809,422
The protein
[wiki|Domains]
[wiki|Methyl-accepting transducer domain] (aa 68-268) (according to UniProt)
Structure
[PDB|2CH7] (from Thermotoga maritima, corresponds to aa 167 ... 281, 39% identity) [pubmed|16622408]
[AF|O06477]
[wiki|Localization]
forms clusters at the cell poles [Pubmed|21515776]
Expression and Regulation
Operons
genes
[gene|EF0AAAF5BAE8E1F54FCA296643F7B9E3CE257B1D|yfmT]-[gene|63BCB42FC501B57ABC9FF252AC5D04BB729EA6B9|yfmS]
description
[Pubmed|9141694,15033535]
sigma factors
[protein|7024E4162A6D827069F882FDEACA696EBC05DD40|sigD]: sigma factor, [Pubmed|15033535], in [regulon|protein:7024E4162A6D827069F882FDEACA696EBC05DD40|sigD regulon]
additional information
in minimal medium, YfmS is present with 4,200 +/- 800 molecules per cell [PubMed|21515776]
Open in new tab

[gene|EF0AAAF5BAE8E1F54FCA296643F7B9E3CE257B1D|yfmT]→[gene|63BCB42FC501B57ABC9FF252AC5D04BB729EA6B9|yfmS]

2024-10-01 15:10:25

ghost

57

1ecc984aac2b0819e1aa3401111de8ee84edde7b

F5A7965A9921A9579F965D5324320AD715850A5B

Biological materials
Mutant
MGNA-C233 (yfmS::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2231 NBRP B. subtilis, Japan]
BKE07360 ([gene|63BCB42FC501B57ABC9FF252AC5D04BB729EA6B9|yfmS]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE07360 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_GGTCAATTCCATTCACTCCT,  downstream forward: _UP4_TAAGAGACCGGGGACAAACA
BKK07360 ([gene|63BCB42FC501B57ABC9FF252AC5D04BB729EA6B9|yfmS]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK07360 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_GGTCAATTCCATTCACTCCT,  downstream forward: _UP4_TAAGAGACCGGGGACAAACA
References
9141694,15033535,21515776,16622408,36815589

63BCB42FC501B57ABC9FF252AC5D04BB729EA6B9

Page visits: 3939

Time of last update: 2024-10-09 03:40:32

Author of last update: Jstuelk