yrkF
168
putative sulfur carrier protein
locus
BSU_26530
Molecular weight
20.51 kDa
pI
5.99
function
unknown
product
unknown
essential
no
synonyms
yrkF
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0607 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
2,712,577 2,713,134
The protein
Protein family
sulfur carrier protein TusA family (with [protein|D996F581E21395C3F9CC064800C49A765EFC17A7|yrkI], according to UniProt)
[wiki|Domains]
[wiki|Rhodanese domain] (aa 101-185) (according to UniProt)
Structure
[PDB|1DCJ] (E. coli TusA, corresponds to the N-terminal domain of [protein|5FC3DF596816AA4E8541B324EC6DE6D89C90C8E2|yrkF], aa 8 ... 77, 37% identity)
[PDB|3R2U] (metallo--lactamase from Staphylococcus aureus, corresponds to the C-terminal domain of [protein|5FC3DF596816AA4E8541B324EC6DE6D89C90C8E2|yrkF], aa 106 ... 179, 38% identity)
[AF|P54433]
Expression and Regulation
Operons
genes
[gene|6AD1DD074B2F044C6A4E4B98FABC4E7FD67B3139|yrzM]-[gene|8A3F1BFDF85DD96B7FB4EBC807F71639AF69DE98|yrkD]-[gene|1F1FE531622CD218EE8990CDAC6D2D2F9E86FE3F|yrkE]-[gene|5FC3DF596816AA4E8541B324EC6DE6D89C90C8E2|yrkF]-[gene|06CC915A18E5ADD42B784B7BBBFD4C344559A34E|yrkH]-[gene|D996F581E21395C3F9CC064800C49A765EFC17A7|yrkI]-[gene|F3E842844B315FE438F66995CDFB8BA1C32BDF23|yrkJ]-[gene|1BEBD09273240B6B50DABCB160FCCBC205BB2AAE|yrkK]-[gene|2EA9792C1C7CD89E43742F57FFB7300725B6AEF4|yrkL]
description
[Pubmed|22383849]
genes
[gene|6AD1DD074B2F044C6A4E4B98FABC4E7FD67B3139|yrzM]-[gene|8A3F1BFDF85DD96B7FB4EBC807F71639AF69DE98|yrkD]-[gene|1F1FE531622CD218EE8990CDAC6D2D2F9E86FE3F|yrkE]-[gene|5FC3DF596816AA4E8541B324EC6DE6D89C90C8E2|yrkF]-[gene|06CC915A18E5ADD42B784B7BBBFD4C344559A34E|yrkH]-[gene|D996F581E21395C3F9CC064800C49A765EFC17A7|yrkI]
description
[Pubmed|22383849]
Biological materials
Mutant
BKE26530 ([gene|5FC3DF596816AA4E8541B324EC6DE6D89C90C8E2|yrkF]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE26530 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTTTCCTCCTTTTCTT, downstream forward: _UP4_TAAATAAAAAGCATGATGAA
BKK26530 ([gene|5FC3DF596816AA4E8541B324EC6DE6D89C90C8E2|yrkF]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK26530 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTTTCCTCCTTTTCTT, downstream forward: _UP4_TAAATAAAAAGCATGATGAA
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Time of last update: 2025-01-04 04:25:34
Author of last update: Melvin.boenninger