ygzD
168
similar to transcription regulator ([wiki|Xre family])
locus
BSU_08899
Molecular weight
7.60 kDa
pI
7.833
function
unknown
product
putative HTH-type transcriptional regulator
essential
-
synonyms
ygzD
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1476 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
966,671 966,871
The protein
Protein family
[wiki|Xre family]
[wiki|Domains]
[wiki|HTH cro/C1-type domain] (aa 5-59) (according to UniProt)
Structure
[PDB|1UTX] (from Enterococcus faecalis, 41% identity) [pubmed|15359276]
[AF|C0H3X9]
Expression and Regulation
Operons
genes
[gene|5DB65F7EE4EFADFB0B46C2EE5726D4B9FA9D85E9|ygzD]-[gene|FFC5766E471A155D3C5C0DB3A9DA46BE24781965|ygaO]
description
[pubmed|22383849]
regulatory mechanism
[protein|5DB65F7EE4EFADFB0B46C2EE5726D4B9FA9D85E9|ygzD]: repression, [pubmed|39829774], in [regulon|protein:5DB65F7EE4EFADFB0B46C2EE5726D4B9FA9D85E9|ygzD regulon]
Biological materials
Mutant
BKE08899 ([gene|5DB65F7EE4EFADFB0B46C2EE5726D4B9FA9D85E9|ygzD]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE08899 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCATGACGTCTGTCCCCT, downstream forward: _UP4_TTTTGGTTAGAGGAGGAAAA
BKK08899 ([gene|5DB65F7EE4EFADFB0B46C2EE5726D4B9FA9D85E9|ygzD]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK08899 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCATGACGTCTGTCCCCT, downstream forward: _UP4_TTTTGGTTAGAGGAGGAAAA
References
Page visits: 1870
Time of last update: 2025-02-07 05:27:54
Author of last update: Jstuelk