ybfG
168
putative pepdidoglycan binding protein
locus
BSU_02200
Molecular weight
79.05 kDa
pI
4.69
function
unknown
product
putative pepdidoglycan binding protein
essential
no
synonyms
ybfG
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG3409 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
239,644 241,842
The protein
Protein family
fadG family (with [protein|0264C72F95D53F0211B52753DA37B4A8C0E982D2|fadG], according to UniProt)
Structure
[AF|O31447]
Paralogous protein(s)
[protein|0264C72F95D53F0211B52753DA37B4A8C0E982D2|fadG]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|5D159F09BFD98B58A7EDAD37A4DB6468A702D09A|ybfG]-[gene|CEA0A2CE520B8A6E8E9D7C079B954B24137DF686|ybfF]-[gene|3E2A864B904DE4D9F72D2B19257AE81CCED3BE12|ybfE]
description
[Pubmed|22383849]
regulation
the mRNA is processed between [gene|5D159F09BFD98B58A7EDAD37A4DB6468A702D09A|ybfG] and [gene|CEA0A2CE520B8A6E8E9D7C079B954B24137DF686|ybfF] by [protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y], this requires the [protein|EE52DFA35B935E551871D079A9BE877DB2001A3B|ricA]-[protein|6C9A092F38739A3759793EF8B496569CD02C2E3F|ricF]-[protein|EBD15C174A03B7FCDFFE4C5DB5D86E93F1B9CAC4|ricT] complex [Pubmed|29794222]
Biological materials
Mutant
MGNA-B968 (ybfG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1967 NBRP B. subtilis, Japan]
BKE02200 ([gene|5D159F09BFD98B58A7EDAD37A4DB6468A702D09A|ybfG]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE02200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCGATTCCTCCTTTGT, downstream forward: _UP4_TAACTTTAATACAAAACTGC
BKK02200 ([gene|5D159F09BFD98B58A7EDAD37A4DB6468A702D09A|ybfG]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK02200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCGATTCCTCCTTTGT, downstream forward: _UP4_TAACTTTAATACAAAACTGC
References
Research papers
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Time of last update: 2024-12-21 22:40:46
Author of last update: Melvin.boenninger