ssrA

ssrA
168

tmRNA

locus
BSU_misc_RNA_55
function
trans-translation
product
tmRNA
essential
no
synonyms
ssrA

Genomic Context

Categories containing this gene/protein

This gene is a member of the following regulons

Gene
Phenotypes of a mutant
essential in the absence of [protein|F7F780D11A6B11EB62CFA5202D1243A381AB40E1|brfA] [https://www.biorxiv.org/content/biorxiv/early/2019/08/15/732420.full.pdf reference]
impaired in [category|SW.4.1.2|Biofilm formation] [pubmed|35889057]
The protein
Structure
[PDB|1P6V] (from ''Aquifex aeolicus'', the tRNA domain of [protein|5C12BB19B975F7FEBCFA119DAC66338C20FCECFA|ssrA] in complex with [protein|D19519B5A776D6E8EC2BFE7A7D67469CA0A6459A|smpB]) [Pubmed|12904796]
Expression and Regulation
Operons
genes
[gene|D8851F453E5EF18D36F25834A8CB9C61EAF15E44|secG]-[gene|C0B6520E74CE9F7EE3DEC8C0D83E0770F241C4E8|yvaK]-[gene|0472A4346ADA1DC41C9D00E8F3222A0EBB76DFA8|rnr]-[gene|D19519B5A776D6E8EC2BFE7A7D67469CA0A6459A|smpB]-[gene|5C12BB19B975F7FEBCFA119DAC66338C20FCECFA|ssrA]
description
[Pubmed|17369301]
regulation
''[protein|search|yvaK]'': induced by stress ([protein|search|SigB]) [Pubmed|11544224]
sigma factors
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, [Pubmed|11544224], in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]
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[gene|D8851F453E5EF18D36F25834A8CB9C61EAF15E44|secG]→[gene|5C12BB19B975F7FEBCFA119DAC66338C20FCECFA|ssrA]

2024-10-08 02:42:36

ghost

83

5b644e318b4e03f8229d1f7804ae24c07fdeb5dd

238E5C487975E311E1EBD32D07A14F173B276AD8

genes
[gene|D19519B5A776D6E8EC2BFE7A7D67469CA0A6459A|smpB]-[gene|5C12BB19B975F7FEBCFA119DAC66338C20FCECFA|ssrA]
description
[Pubmed|17369301]
regulation
''[protein|search|yvaK]'': [protein|search|SigB] [Pubmed|11544224]
Open in new tab

[gene|D19519B5A776D6E8EC2BFE7A7D67469CA0A6459A|smpB]→[gene|5C12BB19B975F7FEBCFA119DAC66338C20FCECFA|ssrA]

2024-10-07 21:41:16

ghost

102

79314a3579b82df76918096ecacc3b7bd94ed6b9

3806406E5CBA52123D5A75B46E96105A42099755

genes
[gene|C0B6520E74CE9F7EE3DEC8C0D83E0770F241C4E8|yvaK]-[gene|0472A4346ADA1DC41C9D00E8F3222A0EBB76DFA8|rnr]-[gene|D19519B5A776D6E8EC2BFE7A7D67469CA0A6459A|smpB]-[gene|5C12BB19B975F7FEBCFA119DAC66338C20FCECFA|ssrA]
description
[Pubmed|17369301]
regulation
''[protein|search|yvaK]'': induced by stress ([protein|search|SigB]) [Pubmed|11544224]
Open in new tab

[gene|C0B6520E74CE9F7EE3DEC8C0D83E0770F241C4E8|yvaK]→[gene|5C12BB19B975F7FEBCFA119DAC66338C20FCECFA|ssrA]

2024-10-09 04:31:09

ghost

84

d8154c99b5174d2c9614c36d072e1652057bf9f1

E221678AD029D36CCA9613ABC361FB40A01462F7

References
Reviews
12730326,10881189,32850966,33815344
Original Publications
18977770,11395451,17369301,10881189,12904796,34488571,35889057,37496314

5C12BB19B975F7FEBCFA119DAC66338C20FCECFA

Page visits: 4911

Time of last update: 2024-10-15 20:29:46

Author of last update: Jstuelk