yvrN
168
similar to [wiki|ABC transporter] (membrane protein)
locus
BSU_33260
Molecular weight
44.95 kDa
pI
4.86
function
unknown
product
[wiki|ABC transporter] (membrane protein)
essential
no
synonyms
yvrN, yziB, yvrM
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0577 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,412,128 3,413,357
The protein
Protein family
[wiki|ABC-4 integral membrane protein family] (according to UniProt)
Structure
[PDB|5WS4] (from Acinetobacter baumanni, 32% identity) [pubmed|29109439]
[AF|P46324]
Paralogous protein(s)
[protein|9680326BAA94A503E2A5C6F0A2479AE0B0467B4C|yknZ]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|7D334BBF7628D1DA001727CF7BEDB4EFA7FF88BA|yvrP]-[gene|0F8048267EC038D8CF673317D969BA27735473A7|yvrO]-[gene|5AEDC5B857537B7D2A2637C0BC5BE78FD09A66B3|yvrN]
description
[Pubmed|20817675]
regulatory mechanism
[protein|08CFA2C72931A75532D4289BC1D18A826DE9F9CA|comK]: activation, [Pubmed|11948146], in [regulon|protein:08CFA2C72931A75532D4289BC1D18A826DE9F9CA|comK regulon]
[protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]: repression, [Pubmed|20817675], in [regulon|protein:E5110D9C36E8C55AFD1419987B14A53232165F20|abrB regulon]
Biological materials
Mutant
MGNA-B056 (yvrN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1055 NBRP B. subtilis, Japan]
BKE33260 ([gene|5AEDC5B857537B7D2A2637C0BC5BE78FD09A66B3|yvrN]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE33260 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GGATTGAAAGGAGATTCGAA, downstream forward: _UP4_TAAAAAGAACGCATCCAATT
BKK33260 ([gene|5AEDC5B857537B7D2A2637C0BC5BE78FD09A66B3|yvrN]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK33260 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GGATTGAAAGGAGATTCGAA, downstream forward: _UP4_TAAAAAGAACGCATCCAATT
References
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Time of last update: 2024-10-12 17:06:06
Author of last update: Jstuelk