opuD
168
glycine betaine and arsenobetaine transporter
locus
BSU_30070
Molecular weight
55.95 kDa
pI
9.51
function
compatible solute transport
product
glycine betaine transporter
essential
no
synonyms
opuD, ytfQ
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1292 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,076,818 3,078,356
The protein
Catalyzed reaction/ biological activity
uptake of glycine betaine and arsenobetaine [pubmed|29159878]
Protein family
BCCT transporter (TC 2.A.15) family (single member, according to UniProt)
Structure
[PDB|4AIN] (BetP from Corynebacterium glutamicum, 44% identity) [pubmed|22940865]
[AF|P54417]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|86274AAF9E0D0882F1AD9D4A528BECB013B71C38|ytfP]-[gene|597B517CA4277E33153F80919213BFF7BE495563|opuD]
description
[Pubmed|22383849]
regulation
induced by cold stress [Pubmed|21296969]
sigma factors
[protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA]: sigma factor, [Pubmed|21296969], in [regulon|protein:360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA regulon]
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, [Pubmed|21296969], in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]
Biological materials
Mutant
MGNA-A815 (opuD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/815 NBRP B. subtilis, Japan]
1A1052 ( ''opuD''::''kan''), [Pubmed|21296969], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A1052&Search=1A1052 BGSC]
1A1053 ( ''opuD''::''kan''), [Pubmed|21296969], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A1053&Search=1A1053 BGSC]
1A1054 ( ''opuD''::''kan''), [Pubmed|21296969], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A1054&Search=1A1054 BGSC]
1A1055 ( ''opuD''::''kan''), [Pubmed|21296969], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A1055&Search=1A1055 BGSC]
BKE30070 ([gene|597B517CA4277E33153F80919213BFF7BE495563|opuD]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE30070 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCTCACCCTCTAATTT, downstream forward: _UP4_TAACAAAAAAGATCTTTCCG
BKK30070 ([gene|597B517CA4277E33153F80919213BFF7BE495563|opuD]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK30070 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCTCACCCTCTAATTT, downstream forward: _UP4_TAACAAAAAAGATCTTTCCG
labs
[wiki|Erhard Bremer], University of Marburg, Germany [http://www.uni-marburg.de/fb17/fachgebiete/mikrobio/molmibi homepage]
References
Reviews
Original Publications
Page visits: 6133
Time of last update: 2024-12-21 13:25:53
Author of last update: Melvin.boenninger