yesY
168
similar to rhamnogalacturonan acetylesterase
locus
BSU_07070
Molecular weight
24.45 kDa
pI
5.6
function
unknown
product
unknown
essential
no
synonyms
yesY
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG2755 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
774,138 774,791
The protein
Protein family
[wiki|'GDSL' lipolytic enzyme family] (according to UniProt)
Structure
[PDB|2O14] ([protein|D2790591E8C3B86BF91F6E1B6DADBA306D5EF758|yxiM], 35% identity)
[AF|O31528]
Paralogous protein(s)
[protein|585CA3154C0405697C4707E5B1D9359963999C54|yesT], [protein|D2790591E8C3B86BF91F6E1B6DADBA306D5EF758|yxiM]
Expression and Regulation
Operons
genes
[gene|65704140C3B95619D6C0962CB40452D373E2740F|yesW]-[gene|217BAA94FB926CDA7CA8800BC6B08371792CEE31|yesX]-[gene|578B79EB64B804FCAACA73AB22458481371A815C|yesY]-[gene|3226901F1D7C1F21296AB974CAE3656C18BE8F69|yesZ]
description
[Pubmed|22383849]
regulation
induced by pectin [Pubmed|35881471]
repressed by glucose ([protein|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|ccpA]) [pubmed|35881471]
regulatory mechanism
[protein|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|ccpA]: repression, [pubmed|35881471], in [regulon|protein:E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|ccpA regulon]
genes
[gene|A96A83684E1E6E8705265D3932DA60FF47C23E3B|rhiL]-[gene|2DC415DCC2ECC3B46526108638DDB46C28832041|rhiF]-[gene|0B11FACEB5E96D166AC1EA0E32C68FCDAF8327E4|rhiG]-[gene|8EED04FCE6E2900B729178209FB281F5463B2540|rhiN]-[gene|BF0E202739BFD461E418655ECD9C3425AC556FA3|rhgR]-[gene|585CA3154C0405697C4707E5B1D9359963999C54|yesT]-[gene|E4C4AEBA8DAEF7DA1B49432213B2B3EA2AF6B34B|yesU]-[gene|8FE909876A7A21B436CA0CFB90ED190BAD17C8E1|yesV]-[gene|65704140C3B95619D6C0962CB40452D373E2740F|yesW]-[gene|217BAA94FB926CDA7CA8800BC6B08371792CEE31|yesX]-[gene|578B79EB64B804FCAACA73AB22458481371A815C|yesY]-[gene|3226901F1D7C1F21296AB974CAE3656C18BE8F69|yesZ]
description
[Pubmed|22383849]
regulation
induced by pectin ([protein|BF0E202739BFD461E418655ECD9C3425AC556FA3|rhgR], [protein|F09661C8A483D0FC796204102021104A4373F895|rhgL]) [Pubmed|19651770,35881471]
repressed by glucose ([protein|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|ccpA]) [pubmed|35881471]
regulatory mechanism
[protein|BF0E202739BFD461E418655ECD9C3425AC556FA3|rhgR]: activation, [Pubmed|19651770], in [regulon|protein:BF0E202739BFD461E418655ECD9C3425AC556FA3|rhgR regulon]
[protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA]: Sigma factor, [pubmed|35881471], in [regulon|protein:360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA regulon]
[protein|F09661C8A483D0FC796204102021104A4373F895|rhgL]: activation, [pubmed|35881471], in [regulon|protein:F09661C8A483D0FC796204102021104A4373F895|rhgL regulon]
[protein|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|ccpA]: repression, [pubmed|35881471], in [regulon|protein:E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|ccpA regulon]
Biological materials
Mutant
MGNA-B454 (yesY::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1453 NBRP B. subtilis, Japan]
BKE07070 ([gene|578B79EB64B804FCAACA73AB22458481371A815C|yesY]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE07070 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTTTCATTCCTCCTCG, downstream forward: _UP4_ATCATCAAAGAAAGGTGAAA
BKK07070 ([gene|578B79EB64B804FCAACA73AB22458481371A815C|yesY]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK07070 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTTTCATTCCTCCTCG, downstream forward: _UP4_ATCATCAAAGAAAGGTGAAA
References
Page visits: 3494
Time of last update: 2024-12-26 08:25:55
Author of last update: Melvin.boenninger