ycgR

ycgR
168

unknown

locus
BSU_03250
Molecular weight
31.78 kDa
pI
9.5
Protein length
294 aaSequenceBlast
Gene length
885 bpSequenceBlast
function
unknown
product
unknown
essential
no
ec
null
synonyms
ycgR
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0701 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
350,858  351,742
The protein
Protein family
UPF0718 family (single member, according to UniProt)
Structure
[AF|P94395]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|51EF3C9A48FA7367576656F5E79D38D1B56BF6A5|ycgR]-[gene|99C8AA68035A9580FA3145ABE66F4DD63CDD6AE8|ycgQ]
description
[pubmed|22383849]
regulation
expression is reduced in a [[SigV]] mutant [Pubmed|21926231]
sigma factors
[protein|081DF3EE9FA56209D648C7677188C61CE3AA8E41|sigM]: sigma factor, [Pubmed|18179421], in [regulon|protein:081DF3EE9FA56209D648C7677188C61CE3AA8E41|sigM regulon]
[protein|D04629D798E458AD538809BB2B150B7FA81D2C7E|sigV]: sigma factor, [pubmed|], in [regulon|protein:D04629D798E458AD538809BB2B150B7FA81D2C7E|sigV regulon]
Open in new tab

[gene|51EF3C9A48FA7367576656F5E79D38D1B56BF6A5|ycgR]->[gene|99C8AA68035A9580FA3145ABE66F4DD63CDD6AE8|ycgQ]

2024-12-11 10:30:33

Bzhu

49

0d6cf343eafb4f1742acd96da53020c015f392d9

09269EBC5FF214A154AD4B33655285393015971E

genes
[gene|1AA67AD33622538F7BAD64B54FAE6FD8103BF9BE|ycgS]-[gene|51EF3C9A48FA7367576656F5E79D38D1B56BF6A5|ycgR]-[gene|99C8AA68035A9580FA3145ABE66F4DD63CDD6AE8|ycgQ]
description
[pubmed|22383849]
Open in new tab

[gene|1AA67AD33622538F7BAD64B54FAE6FD8103BF9BE|ycgS]->[gene|99C8AA68035A9580FA3145ABE66F4DD63CDD6AE8|ycgQ]

2024-12-21 14:52:58

Jstuelk

56

fbeefc0221dd5b823e87a5cc2d13fc1691682968

AC6DF1F800711EA067F827D3D831672E8870FA2E

Biological materials
Mutant
MGNA-B996 (ycgR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1995 NBRP B. subtilis, Japan]
BKE03250 ([gene|51EF3C9A48FA7367576656F5E79D38D1B56BF6A5|ycgR]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE03250 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CACAATAAAACCTCCGCTCA,  downstream forward: _UP4_TCACTACTGGTAAAGGGGTG
BKK03250 ([gene|51EF3C9A48FA7367576656F5E79D38D1B56BF6A5|ycgR]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK03250 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CACAATAAAACCTCCGCTCA,  downstream forward: _UP4_TCACTACTGGTAAAGGGGTG

51EF3C9A48FA7367576656F5E79D38D1B56BF6A5

Page visits: 1912

Time of last update: 2024-12-21 23:22:18

Author of last update: Melvin.boenninger