ycgR
168
unknown
locus
BSU_03250
Molecular weight
31.78 kDa
pI
9.5
function
unknown
product
unknown
essential
no
ec
null
synonyms
ycgR
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0701 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
350,858 351,742
The protein
Protein family
UPF0718 family (single member, according to UniProt)
Structure
[AF|P94395]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|51EF3C9A48FA7367576656F5E79D38D1B56BF6A5|ycgR]-[gene|99C8AA68035A9580FA3145ABE66F4DD63CDD6AE8|ycgQ]
description
[pubmed|22383849]
regulation
expression is reduced in a [[SigV]] mutant [Pubmed|21926231]
sigma factors
[protein|081DF3EE9FA56209D648C7677188C61CE3AA8E41|sigM]: sigma factor, [Pubmed|18179421], in [regulon|protein:081DF3EE9FA56209D648C7677188C61CE3AA8E41|sigM regulon]
[protein|D04629D798E458AD538809BB2B150B7FA81D2C7E|sigV]: sigma factor, [pubmed|], in [regulon|protein:D04629D798E458AD538809BB2B150B7FA81D2C7E|sigV regulon]
genes
[gene|1AA67AD33622538F7BAD64B54FAE6FD8103BF9BE|ycgS]-[gene|51EF3C9A48FA7367576656F5E79D38D1B56BF6A5|ycgR]-[gene|99C8AA68035A9580FA3145ABE66F4DD63CDD6AE8|ycgQ]
description
[pubmed|22383849]
Biological materials
Mutant
MGNA-B996 (ycgR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1995 NBRP B. subtilis, Japan]
BKE03250 ([gene|51EF3C9A48FA7367576656F5E79D38D1B56BF6A5|ycgR]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE03250 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAATAAAACCTCCGCTCA, downstream forward: _UP4_TCACTACTGGTAAAGGGGTG
BKK03250 ([gene|51EF3C9A48FA7367576656F5E79D38D1B56BF6A5|ycgR]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK03250 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAATAAAACCTCCGCTCA, downstream forward: _UP4_TCACTACTGGTAAAGGGGTG
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Time of last update: 2024-10-06 11:12:05
Author of last update: Melvin.boenninger