ythP
168
similar to [wiki|ABC transporter] (ATP-binding protein)
locus
BSU_30010
Molecular weight
26.36 kDa
pI
5.26
function
unknown
product
[wiki|ABC transporter] (ATP-binding protein)
essential
no
synonyms
ythP
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1131 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,071,400 3,072,110
The protein
Protein family
[wiki|ABC transporter superfamily] (according to UniProt)
[wiki|Domains]
[wiki|ABC transporter domain] (aa 4-255) (according to UniProt)
Structure
[PDB|4RVC] (from Geobacillus kaustophilus, 44% identity) [pubmed|25724946]
[AF|O34977]
Paralogous protein(s)
[protein|59A7B26F810D7FEB07C176A8B2ECF6B83803DE49|ecsA]
Expression and Regulation
Operons
genes
[gene|47C1A154AF6F67CA507A9F4FEA9576E7131EFB6D|ythP]-[gene|3ACDFBD5615510FA015486C7A3C7023226EC3476|ythQ]
description
[Pubmed|11866510]
regulation
expressed under conditions of cell wall stress ([protein|search|SigW]) [Pubmed|11866510,12207695]
sigma factors
[protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|sigW]: sigma factor, [Pubmed|11866510,12207695], in [regulon|protein:3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|sigW regulon]
Biological materials
Mutant
MGNA-A817 (ythP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/817 NBRP B. subtilis, Japan]
BKE30010 ([gene|47C1A154AF6F67CA507A9F4FEA9576E7131EFB6D|ythP]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE30010 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAAACTCACTCACCTCCAA, downstream forward: _UP4_AAGGCAGTTCAAGGTGATCG
BKK30010 ([gene|47C1A154AF6F67CA507A9F4FEA9576E7131EFB6D|ythP]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK30010 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAAACTCACTCACCTCCAA, downstream forward: _UP4_AAGGCAGTTCAAGGTGATCG
References
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Time of last update: 2024-12-22 08:48:04
Author of last update: Jstuelk