yxdM
168
[wiki|ABC transporter] (permease)
locus
BSU_39630
Molecular weight
70.35 kDa
pI
9.27
function
export of toxic peptides
product
[wiki|ABC transporter] (permease)
essential
no
synonyms
yxdM, apeB
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0577 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
4,068,550 4,070,418
The protein
Protein family
[wiki|ABC-4 integral membrane protein family] (according to UniProt)
Structure
[AF|P42424]
Paralogous protein(s)
[protein|AC7F08DC1DF7DD2F9AFF84041D357B286B1244AC|psdB]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|8B4267532B9788AEB5EF39E2695C1FDA494C7055|yxdL]-[gene|4423383A3F6DAFDFA210F4BEEF7D8CBEC674DCEA|yxdM]-[gene|6D9153BA698101C3EE1CD68B76419ECD300740F8|yxeA]
description
[Pubmed|15289557]
regulation
induced by a cationic antimicrobial peptide, LL-37 ([protein|search|YxdJ]) [Pubmed| 21078927]
regulatory mechanism
[protein|F3C5505E311E6DDABAFA87899F28CF6596CDBA63|yxdJ]: activation, [Pubmed|15289557], in [regulon|protein:F3C5505E311E6DDABAFA87899F28CF6596CDBA63|yxdJ regulon]
Biological materials
Mutant
MGNA-B705 (yxdM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1704 NBRP B. subtilis, Japan]
BKE39630 ([gene|4423383A3F6DAFDFA210F4BEEF7D8CBEC674DCEA|yxdM]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE39630 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GGCCCTTTTGTTTCTCGTGA, downstream forward: _UP4_ATGAACAAGTAAGGGGAGTG
BKK39630 ([gene|4423383A3F6DAFDFA210F4BEEF7D8CBEC674DCEA|yxdM]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK39630 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GGCCCTTTTGTTTCTCGTGA, downstream forward: _UP4_ATGAACAAGTAAGGGGAGTG
References
Reviews
Original Publications
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Time of last update: 2024-12-30 12:19:32
Author of last update: Jstuelk