yqkA
168
unknown
locus
BSU_23670
Molecular weight
38.88 kDa
pI
8.16
function
unknown
product
unknown
essential
no
synonyms
yqkA
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG2320 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
2,462,193 2,463,224
The protein
Protein family
C-terminal part: UPF0157 (GrpB) family (single member, according to UniProt)
[wiki|Domains]
N-terminal [wiki|N-acetyltransferase domain] (according to UniProt)
C-terminal GrpB superfamily domain
Structure
[PDB|2NRK] (GrpB from Enterococcus faecalis, corresponds to the C-terminal domain, aa 153-318)
[AF|P54564]
Expression and Regulation
Operons
genes
[gene|5B8A6D282E34683726BD6C36E09A6C36E8F99795|yqjY]-[gene|9F88AC3A792F4EE8AA853849BBCF5065717B1D8B|yqjZ]-[gene|3ECD25A4ED9556E74112285B11FC180A7091D730|yqkA]-[gene|DC1C1D4BE1A7F4E28792A2B8273AFE2C7F90E58C|yqkB]-[gene|30363923724EBD39C27967B25B486C71453190D1|yqkC]
description
[Pubmed|22383849]
genes
[gene|F0BC150F59730E64BA9AB3F979544EF6B5CC4E9E|polY2]-[gene|9BC3DF46C944A0FD5CAAB4513C4AF00EFC5FC8D5|yqjX]-[gene|5B8A6D282E34683726BD6C36E09A6C36E8F99795|yqjY]-[gene|9F88AC3A792F4EE8AA853849BBCF5065717B1D8B|yqjZ]-[gene|3ECD25A4ED9556E74112285B11FC180A7091D730|yqkA]-[gene|DC1C1D4BE1A7F4E28792A2B8273AFE2C7F90E58C|yqkB]-[gene|30363923724EBD39C27967B25B486C71453190D1|yqkC]
description
[Pubmed|22383849]
regulation
induced upon DNA damage ([protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|lexA]) [Pubmed|15469515,16267290]
regulatory mechanism
[protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|lexA]: repression, [Pubmed|15469515,16267290], in [regulon|protein:D267AF38B0CF107042326E9B8F3DD3C9C85840E4|lexA regulon]
Biological materials
Mutant
MGNA-C407 (yqkA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2405 NBRP B. subtilis, Japan]
BKE23670 ([gene|3ECD25A4ED9556E74112285B11FC180A7091D730|yqkA]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE23670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATTCAATCATTCGTGTTCTC, downstream forward: _UP4_TTATGAACATACATGTGACA
BKK23670 ([gene|3ECD25A4ED9556E74112285B11FC180A7091D730|yqkA]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK23670 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATTCAATCATTCGTGTTCTC, downstream forward: _UP4_TTATGAACATACATGTGACA
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Time of last update: 2025-01-04 18:17:11
Author of last update: Jstuelk