ytrC

ytrC
168

ABC transporter (hydrophobic protein, probably channel protein)

Locus
BSU_30440
Molecular weight
36.80 kDa
Isoelectric point
7.74
Protein length
328 aaSequenceBlast
Gene length
987 bpSequenceBlast
Function
unknown
Product
ABC transporter (hydrophobic protein, probably channel protein)
Essential
no
Synonyms
ytrC
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms

This gene is a member of the following regulons

Gene
Coordinates
3,116,996  3,117,982
The protein
Protein family
ABC-5 integral membrane protein family (with YtrD, according to UniProt)
Structure
O34898 (AlphaFold)
Paralogous protein(s)
YtrD
Localization
cell membrane (according to UniProt)
Expression and Regulation
Operons
Genes
ytrG-ytrA-ytrB-ytrC-ytrD-ytrE-ytrF
Description
PubMed
Regulation
expressed early in the stationary phase PubMed
Regulatory mechanism
YtrA: repression, PubMed, in ytrA regulon
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
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ytrG→ytrF

2025-04-03 11:46:28

Jstuelk

125

511c9f88e4f29ce72433096dbf0fd3dc5c038eeb

AE29C5AEECDD6994F28E6275F3C275A0539AF619

Biological materials
Mutant
GP3189 (ΔytrC), available in Jörg Stülke's lab PubMed
GP2646 Δ(ytrG-ytrA-ytrB-ytrC-ytrD-ytrE-ytrF)::ermC, available in Jörg Stülke's lab PubMed
GP3205 Δ(ytrC-ytrD)::cat, available in Jörg Stülke's lab PubMed
MGNA-B539 (ytrC::erm), available at the NBRP B. subtilis, Japan
BKE30440 (ytrC::erm  trpC2) available at BGSC and in Jörg Stülke's lab,  PubMed, upstream reverse: _UP1_CTCTCGATAGAGGAGACCTC,  downstream forward: _UP4_TAAGAAATGCCTTAGGTTTG
BKK30440 (ytrC::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CTCTCGATAGAGGAGACCTC,  downstream forward: _UP4_TAAGAAATGCCTTAGGTTTG
References
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Page visits: 4841

Time of last update: 2025-04-14 17:41:39

Author of last update: Jstuelk