yrkL
168
similar to NAD(P)H oxidoreductase
locus
BSU_26470
Molecular weight
19.95 kDa
pI
5.36
function
unknown
product
unknown
essential
no
synonyms
yrkL
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG2249 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
2,708,175 2,708,699
The protein
Protein family
NAD(P)H dehydrogenase (quinone) family (with [protein|E8048E181756BCE307CF28CF31664421404748A4|ywrO] and [protein|2782BD764716CF5FAD0988284310CF75508F2286|ydeQ], according to UniProt)
Structure
[PDB|5LVA] (from Streptomyces violaceus, 55% identity) [pubmed|27714222]
[AF|P54439]
Paralogous protein(s)
[protein|E8048E181756BCE307CF28CF31664421404748A4|ywrO], [protein|2782BD764716CF5FAD0988284310CF75508F2286|ydeQ]
Expression and Regulation
Operons
genes
[gene|1BEBD09273240B6B50DABCB160FCCBC205BB2AAE|yrkK]-[gene|2EA9792C1C7CD89E43742F57FFB7300725B6AEF4|yrkL]
description
[pubmed|22383849]
genes
[gene|6AD1DD074B2F044C6A4E4B98FABC4E7FD67B3139|yrzM]-[gene|8A3F1BFDF85DD96B7FB4EBC807F71639AF69DE98|yrkD]-[gene|1F1FE531622CD218EE8990CDAC6D2D2F9E86FE3F|yrkE]-[gene|5FC3DF596816AA4E8541B324EC6DE6D89C90C8E2|yrkF]-[gene|06CC915A18E5ADD42B784B7BBBFD4C344559A34E|yrkH]-[gene|D996F581E21395C3F9CC064800C49A765EFC17A7|yrkI]-[gene|F3E842844B315FE438F66995CDFB8BA1C32BDF23|yrkJ]-[gene|1BEBD09273240B6B50DABCB160FCCBC205BB2AAE|yrkK]-[gene|2EA9792C1C7CD89E43742F57FFB7300725B6AEF4|yrkL]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-C505 (yrkL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2503 NBRP B. subtilis, Japan]
BKE26470 ([gene|2EA9792C1C7CD89E43742F57FFB7300725B6AEF4|yrkL]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE26470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTAGACTGATTATCCTTT, downstream forward: _UP4_TAATCCGGTATTCGCGAGGG
BKK26470 ([gene|2EA9792C1C7CD89E43742F57FFB7300725B6AEF4|yrkL]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK26470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTAGACTGATTATCCTTT, downstream forward: _UP4_TAATCCGGTATTCGCGAGGG
References
Research papers
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Time of last update: 2025-02-06 03:35:56
Author of last update: Melvin.boenninger