ytcQ
168
polygalacturonan and rhamnogalacturonan [wiki|ABC transporter] (solute-binding lipoprotein)
locus
BSU_30160
Molecular weight
55.14 kDa
pI
4.96
function
uptake of polygalacturonan and rhamnogalacturonan
product
polygalacturonan and rhamnogalacturonan [wiki|ABC transporter] (solute-binding lipoprotein)
essential
no
synonyms
ytcQ
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1653 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,085,800 3,087,296
The protein
Protein family
[wiki|Bacterial solute-binding protein 1 family] (according to UniProt)
Structure
[AF|Q795R2]
Paralogous protein(s)
[protein|A4DA5C00BA37FF65E4190EC95B183ABAF1C9364D|lplA]
[wiki|Localization]
associated to the membrane (via [protein|87B212C8C61483DF2874762A3B77111616C616A5|ytcP]-[protein|4ED1DD17694A06CFDFF48943BAE8AEC2CCCB0401|yteP]) [Pubmed|10092453]
Expression and Regulation
Operons
genes
[gene|87B212C8C61483DF2874762A3B77111616C616A5|ytcP]-[gene|2D46E89AF6157B49BD443F47DB4A7258F22E8A24|ytcQ]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-A806 (ytcQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/806 NBRP B. subtilis, Japan]
BKE30160 ([gene|2D46E89AF6157B49BD443F47DB4A7258F22E8A24|ytcQ]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE30160 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGTACCCCTCCGTTTCA, downstream forward: _UP4_TAACATTGGAAAAACCCAAA
BKK30160 ([gene|2D46E89AF6157B49BD443F47DB4A7258F22E8A24|ytcQ]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK30160 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGTACCCCTCCGTTTCA, downstream forward: _UP4_TAACATTGGAAAAACCCAAA
References
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Time of last update: 2024-12-19 15:10:19
Author of last update: Jstuelk