gerW
168
germination protein
locus
BSU_29500
Molecular weight
16.20 kDa
pI
4.99
function
unknown
product
germination protein
essential
no
ec
null
synonyms
gerW, ytfJ
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG3874 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,018,309 3,018,764
Phenotypes of a mutant
no [wiki|germination] in response to l-alanine [Pubmed|23921501], this has been disputed [Pubmed|25790435]
The protein
Structure
[AF|O34806]
Modification
phosphorylated on Arg-125 [pubmed|31221751]
[wiki|Localization]
in the dormant spore [Pubmed|23921501]
Expression and Regulation
Operons
genes
[gene|9F7A754B2867CED5CDF3F06009DF5DBDD0877BAF|ytfI]-[gene|1FDD81F50B0B0F260A638FECD9B92F8A5F5ED126|gerW]
description
[Pubmed|9387221]
regulation
expressed early during sporulation in the forespore ([protein|search|SigF]) [Pubmed|16497325]
sigma factors
[protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|sigF]: sigma factor, [Pubmed|23921501,16497325], in [regulon|protein:CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|sigF regulon]
Biological materials
Mutant
MGNA-A112 (ytfJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/112 NBRP B. subtilis, Japan]
BKE29500 ([gene|1FDD81F50B0B0F260A638FECD9B92F8A5F5ED126|gerW]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE29500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATGGTCTGCCATATACGCTT, downstream forward: _UP4_TAAAAAAAGGTTAACTGCGC
BKK29500 ([gene|1FDD81F50B0B0F260A638FECD9B92F8A5F5ED126|gerW]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK29500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATGGTCTGCCATATACGCTT, downstream forward: _UP4_TAAAAAAAGGTTAACTGCGC
References
Page visits: 4734
Time of last update: 2024-12-22 10:34:21
Author of last update: Jstuelk