ydiF
168
housekeeping subfamily F ABC ATPase
locus
BSU_05950
Molecular weight
73.27 kDa
pI
4.87
function
unknown
product
housekeeping subfamily F ABC ATPase
essential
no
synonyms
ydiF
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0488 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
644,528 646,456
The protein
Protein family
[wiki|ABC transporter superfamily] (according to UniProt)
[wiki|ABCF ATPase subfamily] [pubmed|30597160]
[wiki|Domains]
2 [wiki|ABC transporter domain]s (aa 4-259, aa 327-541) (according to UniProt)
Structure
[PDB|3J5S] (EttA from E. coli, 34% identity) [pubmed|24389465]
[PDB|4FIN] (EttA from E. coli, 34% identity) [pubmed|24389466]
[AF|O05519]
Paralogous protein(s)
[protein|2F79DB15D359A127C2D833CC0465E18E1725F539|ykpA], [protein|47B644F334A0BD501E77A198A61CE0F22BAB3E5E|yfmM], [protein|F69F15198ACF8A8347C450EEC09F000EECEDEC41|yfmR]
Expression and Regulation
Operons
genes
[gene|1F56D3275386BB54A774BFA045C09E36D1268471|ydiF]
description
[pubmed|22383849]
Biological materials
Mutant
MGNA-C199 (ydiF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2197 NBRP B. subtilis, Japan]
BKE05950 ([gene|1F56D3275386BB54A774BFA045C09E36D1268471|ydiF]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE05950 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTATTTCACCTCTGCT, downstream forward: _UP4_TAAAAAAGTCAAGCACCTCT
BKK05950 ([gene|1F56D3275386BB54A774BFA045C09E36D1268471|ydiF]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK05950 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTATTTCACCTCTGCT, downstream forward: _UP4_TAAAAAAGTCAAGCACCTCT
References
Reviews
Original Publications
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Time of last update: 2024-12-22 02:41:38
Author of last update: Jstuelk