ybfP
168
similar to transcription factor ([wiki|AraC family])
locus
BSU_02320
Molecular weight
34.06 kDa
pI
6.28
function
unknown
product
unknown
essential
no
synonyms
ybfP
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG2207 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
251,427 252,314
The protein
Protein family
[wiki|AraC family]
[wiki|Domains]
[wiki|HTH araC/xylS-type domain] (aa 8-106) (according to UniProt)
Structure
[AF|O31456]
Expression and Regulation
Operons
genes
[gene|BA60CF44ECA4937FA5C1720B10E7FDABA9AB4664|ybfO]-[gene|1EE8BF589ECDFD5194C86E02A627CCF81899B904|ybfP]-[gene|E06787B6AAD11070751938822F75359CE6EF299C|ybfQ]
description
[Pubmed|12207695]
regulation
repressed during logarithmic growth ([protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]) [Pubmed|18840696]
regulatory mechanism
[protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]: repression, [Pubmed|18840696,20817675], in [regulon|protein:E5110D9C36E8C55AFD1419987B14A53232165F20|abrB regulon]
sigma factors
[protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|sigW]: sigma factor, [Pubmed|11866510,12207695], in [regulon|protein:3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|sigW regulon]
genes
[gene|BA60CF44ECA4937FA5C1720B10E7FDABA9AB4664|ybfO]-[gene|1EE8BF589ECDFD5194C86E02A627CCF81899B904|ybfP]
description
[Pubmed|20817675]
regulation
repressed during logarithmic growth ([protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]) [Pubmed|18840696]
Biological materials
Mutant
BKE02320 ([gene|1EE8BF589ECDFD5194C86E02A627CCF81899B904|ybfP]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE02320 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGCACGCTCCAATCTCC, downstream forward: _UP4_TAGTTTTCAGACAACTACTT
BKK02320 ([gene|1EE8BF589ECDFD5194C86E02A627CCF81899B904|ybfP]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK02320 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGCACGCTCCAATCTCC, downstream forward: _UP4_TAGTTTTCAGACAACTACTT
References
Page visits: 1853
Time of last update: 2024-12-04 05:05:43
Author of last update: Melvin.boenninger