pelB
168
pectate lyase
locus
BSU_18650
Molecular weight
37.95 kDa
pI
9.44
function
degradation of polygalacturonic acid
product
pectate lyase
essential
no
ec
4.2.2.10
synonyms
pelB, ppr
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG3866 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
2,034,745 2,035,782
The protein
Catalyzed reaction/ biological activity
Eliminative cleavage of (1->4)-alpha-D-galacturonan methyl ester to give oligosaccharides with 4-deoxy-6-O-methyl-alpha-D-galact-4-enuronosyl groups at their non-reducing ends (according to UniProt)
Protein family
[wiki|lyase 1 family] (according to UniProt)
Structure
[PDB|3VMV] (from Bacillus sp. N165, 29% identity) [pubmed|22414692]
[AF|O34819]
[wiki|Localization]
extracellular (signal peptide) [Pubmed|18957862]
Biological materials
Mutant
BKE18650 ([gene|19854503A5A0A19E72C8E1BEC65EECC243E96F79|pelB]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE18650 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCACAATATGCTTCCTTT, downstream forward: _UP4_TGATATAAAAGAGGCCCTGC
BKK18650 ([gene|19854503A5A0A19E72C8E1BEC65EECC243E96F79|pelB]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK18650 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCACAATATGCTTCCTTT, downstream forward: _UP4_TGATATAAAAGAGGCCCTGC
References
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Time of last update: 2025-04-03 07:02:21
Author of last update: Melvin.boenninger