yvdR
168
similar to multidrug-efflux transporter
locus
BSU_34500
Molecular weight
11.29 kDa
pI
9.06
function
unknown
product
subunit of unidentified multidrug transporter
essential
no
synonyms
yvdR
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG2076 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,541,823 3,542,143
The protein
Protein family
paired small multidrug resistance protein family ([wiki|PSMR family]) [Pubmed|17942072]
[wiki|drug/metabolite transporter (DMT) superfamily] (according to UniProt)
[wiki|Small multidrug resistance (SMR) (TC 2.A.7.1) family] (according to UniProt)
Structure
[PDB|3B5D] (E. coli EmrE, 33% identity) [pubmed|18024586]
[AF|O06999]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|8417C205E756C27D25BCEA9394DEB0968B5F4F7B|yvdT]-[gene|FDE9E1E86BA06B4CE782CBA32F113D302A0B2231|yvdS]-[gene|18CBED273AD7787971073117DFA0B89BDF149B25|yvdR]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-B618 (yvdR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1617 NBRP B. subtilis, Japan]
BKE34500 ([gene|18CBED273AD7787971073117DFA0B89BDF149B25|yvdR]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE34500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATTTTTCACCTCCCGG, downstream forward: _UP4_TAAAATCAAGGCATATACAG
BKK34500 ([gene|18CBED273AD7787971073117DFA0B89BDF149B25|yvdR]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK34500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATTTTTCACCTCCCGG, downstream forward: _UP4_TAAAATCAAGGCATATACAG
References
Research papers
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Time of last update: 2024-12-30 04:59:30
Author of last update: Melvin.boenninger