yckA
168
similar to amino acid [wiki|ABC transporter] (permease)
locus
BSU_03370
Molecular weight
25.08 kDa
pI
9.43
function
unknown
product
unknown
essential
no
synonyms
yckA
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0765 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
367,305 367,985
The protein
Protein family
[wiki|Binding-protein-dependent transport system permease family] (according to UniProt)
[wiki|Domains]
[wiki|ABC transmembrane type-1 domain] (aa 27-215) (according to UniProt)
Structure
[PDB|4YMS] (amino acid transporter from Caldanaerobacter subterraneus, 35% identity) [pubmed|25848002]
[AF|P42399]
Paralogous protein(s)
[protein|9400DF25487461E3738DDDC72BDDB1589281409D|tcyB], [protein|FFD5F07480A0E5A74852C69C436EE289BA72FC7F|yxeN]
[wiki|Localization]
cell membrane [Pubmed|10092453]
Expression and Regulation
Operons
genes
[gene|7050A2CC4BA2183C3CD22A246846CBCE43D73ABC|yckB]-[gene|1872614A6F7DBF7231348AC3DAE4ED3295ACEB41|yckA]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-C001 (yckA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1999 NBRP B. subtilis, Japan]
BKE03370 ([gene|1872614A6F7DBF7231348AC3DAE4ED3295ACEB41|yckA]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE03370 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATGCTATTGATCATGGCGT, downstream forward: _UP4_TAAACAAACGTTTCATTAAA
BKK03370 ([gene|1872614A6F7DBF7231348AC3DAE4ED3295ACEB41|yckA]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK03370 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATGCTATTGATCATGGCGT, downstream forward: _UP4_TAAACAAACGTTTCATTAAA
References
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Time of last update: 2024-12-21 14:32:38
Author of last update: Jstuelk