yfiR
168
transcriptional regulator ([wiki|TetR family]) of the [gene|09D56215645F3E13803704F96FC6AD3FAAD58EF4|yfiS]-[gene|search|yfiR ]operon
locus
BSU_08370
Molecular weight
23.54 kDa
pI
5.02
function
control of [gene|search|yfiS ]expression
product
transcriptional regulator ([wiki|TetR family])
essential
no
synonyms
yfiR
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1309 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
911,964 912,581
The protein
Protein family
[wiki|TetR family]
[wiki|Domains]
[wiki|HTH tetR-type domain] (aa 11-71) (according to UniProt)
Structure
[PDB|1RKT] [Pubmed|16862575]
[AF|O31560]
Expression and Regulation
Operons
genes
[gene|09D56215645F3E13803704F96FC6AD3FAAD58EF4|yfiS]-[gene|15DE8BAFB36296B5842E283C836D600755786397|yfiR]
description
(according to [http://dbtbs.hgc.jp/COG/prom/yfiSR.html DBTBS]) null
regulatory mechanism
[protein|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|tnrA]: activation, [Pubmed|25755103], in [regulon|protein:857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|tnrA regulon]
[protein|15DE8BAFB36296B5842E283C836D600755786397|yfiR]: repression, [pubmed|], in [regulon|protein:15DE8BAFB36296B5842E283C836D600755786397|yfiR regulon]
genes
[gene|15DE8BAFB36296B5842E283C836D600755786397|yfiR]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-C356 (yfiR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2354 NBRP B. subtilis, Japan]
BKE08370 ([gene|15DE8BAFB36296B5842E283C836D600755786397|yfiR]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE08370 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTTTATCCTTGTGCTCCTTT, downstream forward: _UP4_TAAAGAAACGCGGCAGGAGC
BKK08370 ([gene|15DE8BAFB36296B5842E283C836D600755786397|yfiR]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK08370 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTTTATCCTTGTGCTCCTTT, downstream forward: _UP4_TAAAGAAACGCGGCAGGAGC
References
Reviews
Original Publications
Page visits: 1976
Time of last update: 2025-01-11 14:09:27
Author of last update: Melvin.boenninger