ypdQ
168
similar to RNase HI
locus
BSU_21990
Molecular weight
14.53 kDa
pI
5.62
function
unknown
product
unknown
essential
no
synonyms
ypdQ
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG0328 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
2,310,419 2,310,817
The protein
Protein family
RNase H family (single member, according to UniProt)
[wiki|Domains]
RNase H domain (aa 1-127) (according to UniProt)
Structure
[PDB|1GOC] (RNase HI from E. coli, 30% identity) [pubmed|8393706]
[AF|P54162]
Expression and Regulation
Operons
genes
[gene|7DD4BB8222B2EFE81C32C5521A29256095B9D6C1|ypdP]-[gene|09343BE8357AB24C79B69816FAE65D161E668F01|ypdQ]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-A871 (ypdQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/871 NBRP B. subtilis, Japan]
BKE21990 ([gene|09343BE8357AB24C79B69816FAE65D161E668F01|ypdQ]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE21990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTCTACATATATTTCTGTAG, downstream forward: _UP4_TAAATCTTGATCATTGGTTC
BKK21990 ([gene|09343BE8357AB24C79B69816FAE65D161E668F01|ypdQ]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK21990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTCTACATATATTTCTGTAG, downstream forward: _UP4_TAAATCTTGATCATTGGTTC
References
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Time of last update: 2024-12-30 14:08:26
Author of last update: Melvin.boenninger