yfjO

yfjO
168

similar to ribosomal RNA methyltransferase

locus
BSU_08020
Molecular weight
51.97 kDa
pI
9.81
Protein length
Gene length
function
unknown
product
putative rRNA methyltransferase
essential
no
synonyms
yfjO

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2265 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
873,402  874,802
The protein
Protein family
[wiki|Methyltransferase superfamily] (according to UniProt)
[wiki|class I-like SAM-binding methyltransferase superfamily] (according to UniProt)
[wiki|Domains]
[wiki|TRAM domain] (aa 11-69) (according to UniProt)
[wiki|Cofactors]
Fe-S cluster [pubmed|29292548]
Structure
[PDB|5XJ1] (from Streptococcus pneumoniae, 35% identity) [pubmed|28949991]
[AF|O31545]
Paralogous protein(s)
[protein|B97ABE3233A27A7C8273ED9A1E688247DD37FD12|rlmCD]
Expression and Regulation
Operons
genes
[gene|82CDC97D16426016CA7E75240C1A6D0D600F4375|yfjP]-[gene|05392BB2C32B0405799D4F34E5BA55FC936AB943|yfjO]
description
[pubmed|22383849]
Open in new tab

[gene|82CDC97D16426016CA7E75240C1A6D0D600F4375|yfjP]→[gene|05392BB2C32B0405799D4F34E5BA55FC936AB943|yfjO]

2024-07-17 10:20:21

Jstuelk

53

f0780656463c19550802ca69fcbe4c22787f1b22

5E8CA0DFBDB527F0A8E65EB56DDFD85DEB8250F8

Biological materials
Mutant
MGNA-C276 (yfjO::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2274 NBRP B. subtilis, Japan]
BKE08020 ([gene|05392BB2C32B0405799D4F34E5BA55FC936AB943|yfjO]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE08020 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CACGTTGTTCTCTCCGTTTC,  downstream forward: _UP4_TAAAAAGAACATTTCCCAGT
BKK08020 ([gene|05392BB2C32B0405799D4F34E5BA55FC936AB943|yfjO]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK08020 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CACGTTGTTCTCTCCGTTTC,  downstream forward: _UP4_TAAAAAGAACATTTCCCAGT
References
21824914,28949991

05392BB2C32B0405799D4F34E5BA55FC936AB943

Page visits: 1709

Time of last update: 2024-10-03 02:20:57

Author of last update: Melvin.boenninger