Category: Efp-dependent proteins

[category|SW.6|6. Groups of genes]

[category|SW.6.11|6.11. Efp-dependent proteins]

Name	Function
[gene\|71F490B2C3199734620724B51F8E3D7977C2D8D8\|besA]	iron acquisition
[gene\|73473E6556D374C8623A426E075038AD01AB7025\|cotA]	resistance of the spore
[gene\|20D1174554A03EECE233A1A045F6DF83AF799959\|ctaD]	respiration
[gene\|7FA72D949B930A3C7FF0391CC6CCC58EEFCA839A\|dppD]	uptake of dipeptides
[gene\|06971E9AAB033E2878914A76645F99E97CE8A90A\|fmt]	formylation of Met-tRNA(fMet)
[gene\|5C31D968E3786858B025CE02CFAC48F61700031F\|ggt]	degradation of poly-glutamate capsules
[gene\|7150BABA5086D5E2EB8102E4901A216F43576282\|glmR]	regulation of carbon partitioning between central metabolism and peptidoglycan biosynthesis, localization of [protein\|A8EEC896B279CFDDE9C3A6F146A04EC822E33A4F\|PBP1]
[gene\|44DF1B7E476AD58B3CCC39300FFE0132D0D32AD0\|gltA]	[metabolite\|glutamate] biosynthesis and control of [metabolite\|glutamate] degradation
[gene\|76324E0A6CAA8E1DD0B0C6FAE1CAB402231BF7CC\|gmuC]	glucomannan uptake and phosphorylation
[gene\|EB6F40F8651654E0AB09447C5AD670C35A59F261\|kdgT]	utilization of galacturonic acid
[gene\|BA755FA1CB1E0C006E9A23489A7C8997141AA498\|recJ]	replication fork maintenance
[gene\|F09661C8A483D0FC796204102021104A4373F895\|rhgL]	unknown
[gene\|3CB24D493B3282278B7DC61CE3C793DFA815F9E2\|sigE]	transcription of [wiki\|sporulation ]genes (early mother cell)
[gene\|0DE66A10D9475DC57A140561E8532D3EC038FD6F\|sndA]	utilization of S-methyl-cysteine
[gene\|2C54FE2ADC82FF414D732018C90649D477A925AD\|spo0A]	initiation of [wiki\|sporulation]
[gene\|C9817A54C8E72193280E393D7BD3375BD1751738\|spoIIP]
[gene\|41199C76DF8CA804B7B8878D61228B9542A96AE4\|topA]	relaxation of negatively supercoiled DNA behind RNA polymerase
[gene\|3E84B3AC08D0B314286CEF38534BD81B568F3E0E\|valS]	translation
[gene\|6DF19E4546509687CA194F6B44EEB723C9467B9C\|xkdJ]	unknown
[gene\|BA60CF44ECA4937FA5C1720B10E7FDABA9AB4664\|ybfO]	unknown
[gene\|4264FE54F73766F7029C871E14B47DCFE5E4BC38\|ycxA]	unknown
[gene\|68E585F6670539982E8E8032337DA2043C67FCC4\|ydgB]	spore germination
[gene\|D07BD51E1DDEDA3CE292570AAEAE14C27C064A67\|yhjG]	unknown
[gene\|BA1A7ECAE0B5690F6E6A67785BAB18628701E2A2\|yitG]	unknown
[gene\|ECB23B27C364EEB0BFB4C95BA62E9FF34AC852CF\|ykwB]	unknown
[gene\|081EA0CBCDA7ECDE8D128DD091C132BB194D19EB\|ylxX]	unknown
[gene\|13DC4296015A28975BC7697F134FB6ECD6B11489\|yodT]	unknown
[gene\|74137B4DA75E9AD374356DE0AE05F3E7BFC751FF\|yomQ]	unknown
[gene\|2655683C0EE274CBC41D119FC23FFFC80F79FF57\|yonJ]	unknown
[gene\|12661F79EA61EA386D73923234009C6E9BF62C31\|yqbA]	unknown
[gene\|D8607250EEE380DA8E1CC291B21D5626FA33313E\|yqjN]	unknown
[gene\|6911DFB27F6A23F3775DAC5C289EFA163FBD1E56\|ytcC]	lipopolysaccharide biosynthesis
[gene\|87B212C8C61483DF2874762A3B77111616C616A5\|ytcP]	uptake of polygalacturonan and rhamnogalacturonan
[gene\|A0392469FB5B36C030C003ECC0EC39F71BBC5CD0\|yvdQ]	protection of the spore
[gene\|852ECFA6F254167090AA393E6E0D269F49A4CC6E\|yyaN]	unknown

description

These 35 proteins contains three or more consecutive proline residues and are therefore likely to depend on the translation factor Efp for efficient expression. In the case of [protein|search|Spo0A], dependency on [protein|search|Efp] has been demonstrated [pubmed|36651772]

reference

36651772

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Time of last update: 2023-01-29 17:00:21

Author of last update: Jstuelk

Name	Function
[gene\|71F490B2C3199734620724B51F8E3D7977C2D8D8\|besA]	iron acquisition
[gene\|73473E6556D374C8623A426E075038AD01AB7025\|cotA]	resistance of the spore
[gene\|20D1174554A03EECE233A1A045F6DF83AF799959\|ctaD]	respiration
[gene\|7FA72D949B930A3C7FF0391CC6CCC58EEFCA839A\|dppD]	uptake of dipeptides
[gene\|06971E9AAB033E2878914A76645F99E97CE8A90A\|fmt]	formylation of Met-tRNA(fMet)
[gene\|5C31D968E3786858B025CE02CFAC48F61700031F\|ggt]	degradation of poly-glutamate capsules
[gene\|7150BABA5086D5E2EB8102E4901A216F43576282\|glmR]	regulation of carbon partitioning between central metabolism and peptidoglycan biosynthesis, localization of [protein\|A8EEC896B279CFDDE9C3A6F146A04EC822E33A4F\|PBP1]
[gene\|44DF1B7E476AD58B3CCC39300FFE0132D0D32AD0\|gltA]	[metabolite\|glutamate] biosynthesis and control of [metabolite\|glutamate] degradation
[gene\|76324E0A6CAA8E1DD0B0C6FAE1CAB402231BF7CC\|gmuC]	glucomannan uptake and phosphorylation
[gene\|EB6F40F8651654E0AB09447C5AD670C35A59F261\|kdgT]	utilization of galacturonic acid
[gene\|BA755FA1CB1E0C006E9A23489A7C8997141AA498\|recJ]	replication fork maintenance
[gene\|F09661C8A483D0FC796204102021104A4373F895\|rhgL]	unknown
[gene\|3CB24D493B3282278B7DC61CE3C793DFA815F9E2\|sigE]	transcription of [wiki\|sporulation ]genes (early mother cell)
[gene\|0DE66A10D9475DC57A140561E8532D3EC038FD6F\|sndA]	utilization of S-methyl-cysteine
[gene\|2C54FE2ADC82FF414D732018C90649D477A925AD\|spo0A]	initiation of [wiki\|sporulation]
[gene\|C9817A54C8E72193280E393D7BD3375BD1751738\|spoIIP]
[gene\|41199C76DF8CA804B7B8878D61228B9542A96AE4\|topA]	relaxation of negatively supercoiled DNA behind RNA polymerase
[gene\|3E84B3AC08D0B314286CEF38534BD81B568F3E0E\|valS]	translation
[gene\|6DF19E4546509687CA194F6B44EEB723C9467B9C\|xkdJ]	unknown
[gene\|BA60CF44ECA4937FA5C1720B10E7FDABA9AB4664\|ybfO]	unknown
[gene\|4264FE54F73766F7029C871E14B47DCFE5E4BC38\|ycxA]	unknown
[gene\|68E585F6670539982E8E8032337DA2043C67FCC4\|ydgB]	spore germination
[gene\|D07BD51E1DDEDA3CE292570AAEAE14C27C064A67\|yhjG]	unknown
[gene\|BA1A7ECAE0B5690F6E6A67785BAB18628701E2A2\|yitG]	unknown
[gene\|ECB23B27C364EEB0BFB4C95BA62E9FF34AC852CF\|ykwB]	unknown
[gene\|081EA0CBCDA7ECDE8D128DD091C132BB194D19EB\|ylxX]	unknown
[gene\|13DC4296015A28975BC7697F134FB6ECD6B11489\|yodT]	unknown
[gene\|74137B4DA75E9AD374356DE0AE05F3E7BFC751FF\|yomQ]	unknown
[gene\|2655683C0EE274CBC41D119FC23FFFC80F79FF57\|yonJ]	unknown
[gene\|12661F79EA61EA386D73923234009C6E9BF62C31\|yqbA]	unknown
[gene\|D8607250EEE380DA8E1CC291B21D5626FA33313E\|yqjN]	unknown
[gene\|6911DFB27F6A23F3775DAC5C289EFA163FBD1E56\|ytcC]	lipopolysaccharide biosynthesis
[gene\|87B212C8C61483DF2874762A3B77111616C616A5\|ytcP]	uptake of polygalacturonan and rhamnogalacturonan
[gene\|A0392469FB5B36C030C003ECC0EC39F71BBC5CD0\|yvdQ]	protection of the spore
[gene\|852ECFA6F254167090AA393E6E0D269F49A4CC6E\|yyaN]	unknown