Category: Targets of second messengers

[category|SW.3|3. Information processing]

[category|SW.3.5|3.5. Targets of second messengers]

[category|SW.3.5.1|3.5.1. Targets of c-di-AMP]

Name	Function
[gene\|4B0CADED41695D86193D853AA0E2C02019E68C4C\|c-di-AMP riboswitch, kimA]	control of [gene\|5968E6D4D7378C69EC3E1E05B285069123AA1FD3\|kimA] expression
[gene\|E8ABDF09D775A50E9635CDA2B67DEA762469B336\|c-di-AMP riboswitch, ktrA]	control of [gene\|92D0275E0768780F782F4B3724BC5181E436B6B1\|ktrA]-[gene\|A287B9771A56D03ADCA603C1969CBF03DCB10E95\|ktrB] expression
[gene\|6985ED02AC7A04D4FD5E531C47DD4D1711D7F829\|cpaA]	export of potassium ions
[gene\|31C8DCB4E1E225AC92EC2E11835234C4668AB326\|darA]	adaptation to osmotic stress
[gene\|90AFF93D6E7BC993B2773C12EE400C80A87A4831\|darB]	control of [protein\|CEE73284EFC0DBE8870CE0B474922DED79475A57\|rel] activity, trigger of the stringent response under conditions of potassium starvation
[gene\|D8A8FBC05B9665F72A88685D2B33822C2BB84C62\|khtT]	potassium ion efflux
[gene\|5968E6D4D7378C69EC3E1E05B285069123AA1FD3\|kimA]	potassium uptake
[gene\|92D0275E0768780F782F4B3724BC5181E436B6B1\|ktrA]	potassium uptake
[gene\|15F9BF08762D28CBCD3D9748EFBD29B0D6FD7623\|ktrC]	potassium uptake
[gene\|472E3A2407C83EEE26DB00079D185C4EA2988611\|mgtE]	magnesium uptake
[gene\|75DB6231129C28C5D3791BA43A1261CD46A861E8\|opuCA]	compatible solute transport

[category|SW.3.5.2|3.5.2. Targets of c-di-GMP]

Name	Function
[gene\|D290247A43280532947B707F3AF388D7A7F404D3\|comFB]	compentence
[gene\|C194336ED96FA844FFE9FB43BE59ADC5D6DDB3BE\|motI]	control of [protein\|86C729C7D5ABEE519ADC4A893940600BBB655EF1\|motA] activity
[gene\|70ED3CE683F3A3F785480F40986CABE7729C17C7\|ydaK]	unknown
[gene\|A9C45C522EAF534C41CB75AA364A379E1D11055F\|ykuI]	unknown

[category|SW.3.5.3|3.5.3. Targets of (p)ppGpp]

Name	Function
[gene\|F7B53E8AC92DAD15544C6208C2A5B41BABA73D6D\|dnaG]	[category\|SW.3.1.1\|DNA replication]
[gene\|CB68B3393CA7862C45C624AF7B1ADD188243A01F\|era]	ribosome assembly
[gene\|EC025F78D0BCBD91162BAAB9EAB7D3837E0A3208\|ffh]	presecretory protein translocation
[gene\|9B624751E8BD3EA616B4B50633A558F4CE032E2C\|gdpP]	control of sporulation initiation, cell wall homeostasis
[gene\|1BC994DE60A7BB35DEDD7154581A396D29AA94A7\|gmk]	GTP biosynthesis
[gene\|AB3D18228DB6819B0C81BC7A8BB3408A4F75DC0C\|guaB]	biosynthesis of GMP
[gene\|B7BFC170EEC88DEC6CF932F80805D3F2C0BD3738\|hprT]	purine salvage and interconversion, control of [gene\|4E7B9426CED372AA8A321A147116A3A589FBF20C\|ftsH] expression
[gene\|378B77412D0DEA220A97DEC246410509D9B74D46\|infB]	translation
[gene\|0C40455EB53D25363FC3EB0E84502A76520F5F91\|nahA]	initiation of RNA degradation
[gene\|84E7D672DB40B114DC4D96A4D8834958B47401A7\|obg]	ribosome assembly, may be required to stimulate activity
[gene\|8D0885839CD60C05FB806BBF08AFA05225E83B12\|pgpH]	control of c-di-AMP homeostasis
[gene\|A8C82F5825DE0921DA6B4ACDE0CC31EC7749273C\|purR]	regulation of purine biosynthesis
[gene\|54CD247926F7FABE4ACE85EB7021B62500B47260\|rbgA]	[category\|SW.3.3.1.6\|Ribosome assembly]
[gene\|CEE73284EFC0DBE8870CE0B474922DED79475A57\|rel]	synthesis and degradation of (p)[metabolite\|ppGpp], triggering the stringent response regulon
[gene\|81BCF5C08EC1A580F5E05884BA830130FC7E46E9\|sasB]	ppGpp synthesis independent from stringent response
[gene\|02C84C9A8C0008CC253CBF13584A4B5B2D2B510C\|xpt]	purine salvage and interconversion
[gene\|9F6B78C1932FB56F7F71430DB16BC862A312407B\|ynbA]	rescuing of translationally arrested ribosomes

[category|SW.3.5.4|3.5.4. Targets of ZTP]

Name	Function
[gene\|75DB07A2704FEC2932BD0CDD24E2B3454E9551E1\|zagA]	supply of zinc from [protein\|035154A4160F084BA1CC124D0951937B203E167D\|rpmE] to [protein\|7732A37D59E2643F232F2C0AFE51BCF7A79EDE29\|folE]

[category|SW.3.5.5|3.5.5. Targets of AppppA]

Name	Function
[gene\|AB3D18228DB6819B0C81BC7A8BB3408A4F75DC0C\|guaB]	biosynthesis of GMP

Related category

[category|search|Metabolism of signalling nucleotides]

important original publications

22981860,23671116,23893111,24141192,24163341,25433025,26951678,31132310,31061098

important reviews

21255104,16045609,17208514,19756011,19287449,18714086,23023210,23812326,25636134,25869574,28783096,28965724,32881708,34416118,39216180

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Time of last update: 2024-12-12 12:28:57

Author of last update: Jstuelk

Name	Function
[gene\|4B0CADED41695D86193D853AA0E2C02019E68C4C\|c-di-AMP riboswitch, kimA]	control of [gene\|5968E6D4D7378C69EC3E1E05B285069123AA1FD3\|kimA] expression
[gene\|E8ABDF09D775A50E9635CDA2B67DEA762469B336\|c-di-AMP riboswitch, ktrA]	control of [gene\|92D0275E0768780F782F4B3724BC5181E436B6B1\|ktrA]-[gene\|A287B9771A56D03ADCA603C1969CBF03DCB10E95\|ktrB] expression
[gene\|6985ED02AC7A04D4FD5E531C47DD4D1711D7F829\|cpaA]	export of potassium ions
[gene\|31C8DCB4E1E225AC92EC2E11835234C4668AB326\|darA]	adaptation to osmotic stress
[gene\|90AFF93D6E7BC993B2773C12EE400C80A87A4831\|darB]	control of [protein\|CEE73284EFC0DBE8870CE0B474922DED79475A57\|rel] activity, trigger of the stringent response under conditions of potassium starvation
[gene\|D8A8FBC05B9665F72A88685D2B33822C2BB84C62\|khtT]	potassium ion efflux
[gene\|5968E6D4D7378C69EC3E1E05B285069123AA1FD3\|kimA]	potassium uptake
[gene\|92D0275E0768780F782F4B3724BC5181E436B6B1\|ktrA]	potassium uptake
[gene\|15F9BF08762D28CBCD3D9748EFBD29B0D6FD7623\|ktrC]	potassium uptake
[gene\|472E3A2407C83EEE26DB00079D185C4EA2988611\|mgtE]	magnesium uptake
[gene\|75DB6231129C28C5D3791BA43A1261CD46A861E8\|opuCA]	compatible solute transport

Name	Function
[gene\|F7B53E8AC92DAD15544C6208C2A5B41BABA73D6D\|dnaG]	[category\|SW.3.1.1\|DNA replication]
[gene\|CB68B3393CA7862C45C624AF7B1ADD188243A01F\|era]	ribosome assembly
[gene\|EC025F78D0BCBD91162BAAB9EAB7D3837E0A3208\|ffh]	presecretory protein translocation
[gene\|9B624751E8BD3EA616B4B50633A558F4CE032E2C\|gdpP]	control of sporulation initiation, cell wall homeostasis
[gene\|1BC994DE60A7BB35DEDD7154581A396D29AA94A7\|gmk]	GTP biosynthesis
[gene\|AB3D18228DB6819B0C81BC7A8BB3408A4F75DC0C\|guaB]	biosynthesis of GMP
[gene\|B7BFC170EEC88DEC6CF932F80805D3F2C0BD3738\|hprT]	purine salvage and interconversion, control of [gene\|4E7B9426CED372AA8A321A147116A3A589FBF20C\|ftsH] expression
[gene\|378B77412D0DEA220A97DEC246410509D9B74D46\|infB]	translation
[gene\|0C40455EB53D25363FC3EB0E84502A76520F5F91\|nahA]	initiation of RNA degradation
[gene\|84E7D672DB40B114DC4D96A4D8834958B47401A7\|obg]	ribosome assembly, may be required to stimulate activity
[gene\|8D0885839CD60C05FB806BBF08AFA05225E83B12\|pgpH]	control of c-di-AMP homeostasis
[gene\|A8C82F5825DE0921DA6B4ACDE0CC31EC7749273C\|purR]	regulation of purine biosynthesis
[gene\|54CD247926F7FABE4ACE85EB7021B62500B47260\|rbgA]	[category\|SW.3.3.1.6\|Ribosome assembly]
[gene\|CEE73284EFC0DBE8870CE0B474922DED79475A57\|rel]	synthesis and degradation of (p)[metabolite\|ppGpp], triggering the stringent response regulon
[gene\|81BCF5C08EC1A580F5E05884BA830130FC7E46E9\|sasB]	ppGpp synthesis independent from stringent response
[gene\|02C84C9A8C0008CC253CBF13584A4B5B2D2B510C\|xpt]	purine salvage and interconversion
[gene\|9F6B78C1932FB56F7F71430DB16BC862A312407B\|ynbA]	rescuing of translationally arrested ribosomes