Category: Biosynthesis/ acquisition of amino acids

[category|SW.2|2. Metabolism]

[category|SW.2.3|2.3. Amino acid/ nitrogen metabolism]

[category|SW.2.3.1|2.3.1. Biosynthesis/ acquisition of amino acids]

[category|SW.2.3.1.1|2.3.1.1. Biosynthesis/ acquisition of glutamate/ glutamine/ ammonium assimilation]

Name	Function
[gene\|151A61315ADAA7213502F15C0C0ED636A4C3EA7C\|aimA]	low affinity uptake of [metabolite\|serine], [metabolite\|glutamate], [metabolite\|asparagine], [metabolite\|glycine], [metabolite\|alanine], and [metabolite\|beta-alanine]
[gene\|B84BE9F5BEFE3A295ED5580D66040CD28609A6A1\|alsT]	uptake of glutamine
[gene\|68F4E792B99F86AE9E8F06D2200E128937331F5D\|glnA]	glutamine biosynthesis, control of [protein\|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20\|tnrA] and [protein\|641C4BDD9702804642E1753A9C779E80FABB3919\|glnR] activity
[gene\|BAB70547672C855AEB3A4D4624044340CF582848\|glnH]	[metabolite\|glutamine] uptake
[gene\|C18B886D06879C64B64606371E85A7D4D22DCFAC\|glnK]	regulation of the [gene\|1A415DC85354373EA4866733C3AE43F510BD3C56\|glsA]-[gene\|E371BC4F613C40CB0E8C8CAA97387F3E6735D813\|glnT] operon
[gene\|4E6EA2EABBDAA427E8F9EE1AE1800AF8657CF18B\|glnL]	regulation of the glsA-glnT operon
[gene\|6CE6AFDBE85974B45041DE924A09CC9F56ED79D8\|glnM]	glutamine uptake
[gene\|CD32011A08697B2C121996A02F1BD7BE4F932778\|glnP]	glutamine uptake
[gene\|468BEA9EAEA589D683DB79B2C689A5C6A22AB67F\|glnQ]	glutamine uptake
[gene\|641C4BDD9702804642E1753A9C779E80FABB3919\|glnR]	regulation of glutamine synthesis
[gene\|E371BC4F613C40CB0E8C8CAA97387F3E6735D813\|glnT]	glutamine uptake
[gene\|44DF1B7E476AD58B3CCC39300FFE0132D0D32AD0\|gltA]	[metabolite\|glutamate] biosynthesis and control of [metabolite\|glutamate] degradation
[gene\|AA07CC52B2DD48ACC9D3375E9D531CB1ACBE485A\|gltB]	[metabolite\|glutamate] biosynthesis
[gene\|87BCAE725B02860156D50E1783F6DB68510C811E\|gltC]	regulation of the [metabolite\|glutamate] synthase operon ([gene\|44DF1B7E476AD58B3CCC39300FFE0132D0D32AD0\|gltA]-[gene\|AA07CC52B2DD48ACC9D3375E9D531CB1ACBE485A\|gltB])
[gene\|533EEB1A454D29800C9A00A0BE107ECEE2138DAB\|gltT]	[metabolite\|glutamate] and [metabolite\|aspartate] uptake
[gene\|796BD46066B1E6147048664FA78679B42FA9D628\|nrgA]	ammonium uptake
[gene\|EC7C2A0B5A9A30B2FAA0CF9EEB9830CE0E6F2219\|nrgB]	regulation of ammonium uptake
[gene\|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20\|tnrA]	regulation of nitrogen assimilation

[category|SW.2.3.1.2|2.3.1.2. Biosynthesis/ acquisition of proline]

Name	Function
[gene\|1629A875FCCA0C0EB1C959ED31BB6B3CFA839BF9\|proA]	biosynthesis of proline
[gene\|5592C5163CF024289B850916516E2C8C7AD43136\|proB]	biosynthesis of proline
[gene\|63AFCEE5DEA6B2604C02592C5FB52EDFAE68913E\|proG]	biosynthesis of proline
[gene\|542871C77BE841AA59A65FFE8A44AB85BF9180F0\|proH]	osmoadaptive de novo production of proline
[gene\|93000B579F630E9F0C6EED40D6661E5E15141FDE\|proI]	biosynthesis of proline
[gene\|3F47513FB71276EF1E99B8C427DC8DC0786F8C19\|proJ]	osmoadaptive de novo production of proline
[gene\|B3DF99B747D0A7472E3878920BF3CE7CE954B0BE\|putP]	proline uptake

[category|SW.2.3.1.3|2.3.1.3. Biosynthesis/ acquisition of proline/ based on similarity]

[category|SW.2.3.1.4|2.3.1.4. Biosynthesis/ acquisition of arginine]

Name	Function
[gene\|62F8E0D6BC9DA6390256FA8FB684EA5C9C722AE4\|ahrC]	transcriptional regulator of arginine metabolic genes
[gene\|8321DF6EE5B84CC9A4A5DF670E8611F4D61EBC7E\|argB]	biosynthesis of arginine
[gene\|62678D45FA1CB1B6AB801FB9F574DDE10DEE068D\|argC]	biosynthesis of arginine
[gene\|7FA5502FE82D55EC176F68B74B24293EC9B7D4D7\|argD]	biosynthesis of arginine
[gene\|11E7D77EF9439F817C10BF5D9671C5AE66AF06DC\|argF]	biosynthesis of [metabolite\|arginine]
[gene\|94E5DA4F460FBC02A186D1013C581179F13BCB3E\|argG]	biosynthesis of arginine
[gene\|571789ADA1F7B9DE0F9E205E2DEB9C9166F6C312\|argH]	biosynthesis of arginine
[gene\|0FF858E44B3C557EE2C8B3749A458F152E1C535C\|argJ]	biosynthesis of arginine
[gene\|8D9529D46E11D8B2826A98642706ADCBE1E3434A\|artP]	arginine uptake
[gene\|62BD291B91DB0358754957D84A1F3636C247A697\|artQ]	[metabolite\|arginine] uptake
[gene\|6882EF93EC82872B25C88104F62D6603D2514890\|artR]	[metabolite\|arginine] uptake
[gene\|4202EAE5D0B2A718382092423DD99E35FDE81218\|carA]	biosynthesis of [metabolite\|arginine]
[gene\|7E6386F1949A6F46E4332BAB8F803742EB076AF0\|carB]	biosynthesis of [metabolite\|arginine]
[gene\|9BFB16C12B31ABD70BBB921BCB9E4201E3BDC92D\|rocC]	arginine, ornithine and citrulline uptake
[gene\|B46A8BCEC56E6252712E30F8BF8DA6B836FDE2F6\|rocE]	arginine, ornithine and citrulline uptake
[gene\|FC93BA60BD185DE5EF31D5605F0B8294EC2E8E5A\|sr1]	control of arginine metabolism, glycolysis, and sporulation

[category|SW.2.3.1.5|2.3.1.5. Biosynthesis/ acquisition of aspartate/ asparagine]

Name	Function
[gene\|151A61315ADAA7213502F15C0C0ED636A4C3EA7C\|aimA]	low affinity uptake of [metabolite\|serine], [metabolite\|glutamate], [metabolite\|asparagine], [metabolite\|glycine], [metabolite\|alanine], and [metabolite\|beta-alanine]
[gene\|6F5BBCBA02EA1C016AA37EB63D252A4C07CE6617\|asnB]	control of peptidoglycan hydrolysis
[gene\|9446D9C88CBBBC5A08495D8AA49A92A9F47F2C9B\|asnH]	biosynthesis of asparagine
[gene\|15D150B53A25325DBC414F0C2B0D44AEF4B115A9\|asnO]	biosynthesis of asparagine
[gene\|AE802E1D4F827DED3A5D953C7D034E6A3554C45F\|aspB]	biosynthesis of aspartate
[gene\|210C83EBEBD3DE4946BC511E0249D0032A7CE3D0\|bcaP]	uptake of branched-chain amino acids, threonine, serine, and asparagine
[gene\|3AC4ED647836A1633DC3439BB4F3A74FA78CF2DB\|yveA]	unknown

[category|SW.2.3.1.6|2.3.1.6. Biosynthesis/ acquisition of lysine/ threonine]

Name	Function
[gene\|9AD0E43119BDC65D5F67CE55CD9417E1E6BAE058\|aimB]	uptake of threonine and serine
[gene\|564A2F43F8AABE97FC8F0B1B3382A9F31F02FA18\|asd]	biosynthesis of threonine, lysine, dipicolic acid, peptidoglycan
[gene\|210C83EBEBD3DE4946BC511E0249D0032A7CE3D0\|bcaP]	uptake of branched-chain amino acids, threonine, serine, and asparagine
[gene\|00B4CA4E25858A56F9D4E0ADEE2643F203FEC613\|dapA]	biosynthesis of lysine and peptidoglycan
[gene\|5AB90032031653A913E15B26B3E1AE246E95AABF\|dapB]	biosynthesis of lysine and peptidoglycan
[gene\|185B6596F0468B76BCA85E8753063FAE83445E18\|dapF]	biosynthesis of lysine and peptidoglycan
[gene\|6D6718AC72C9D86EDE16B191EDAB3ABA488B689B\|dapG]	biosynthesis of lysine and peptidoglycan
[gene\|11421D5BD3AB6C205DDA0864F878E2B04340033F\|hom]	biosynthesis of methionine and threonine
[gene\|02F1C926D200DE85C93A0ACEF23AD25FBD12B0BD\|lysA]	biosynthesis of lysine
[gene\|F7B947938FB40E54D89A719E9610C5A4AA400674\|lysC]	biosynthesis of lysine
[gene\|094AE3AC8DFAFC8048ADAAB34F76DF2562D80CE7\|patA]	biosynthesis of lysine and peptidoglycan
[gene\|290302BA8A4E44C62AE3071C1F7DE18B20605607\|thrB]	biosynthesis of threonine
[gene\|4A839F8A53DF75DF01FE410EBD3361759C3B1C86\|thrC]	biosynthesis of threonine
[gene\|548E92526BC00999031D6EDE43FE061CE0448AFC\|thrD]	biosynthesis of threonine
[gene\|A4B7CF7A1C704C750AFAD97A43AF975260935083\|thrR]	control of threonine biosynthesis
[gene\|D6F1906CE8386F78F451D6B794F74DE4AD25AC9C\|ykuR]	biosynthesis of lysine and peptidoglycan
[gene\|5762418690734FB959506B7317208CCA1A340720\|yvsH]	uptake of lysine

[category|SW.2.3.1.7|2.3.1.7. Biosynthesis/ acquisition of lysine/ threonine/ based on similarity]

Name	Function
[gene\|716FE06124544C05CC34BA2E643B4DBD27F04998\|ykuQ]	biosynthesis of lysine and peptidoglycan

[category|SW.2.3.1.8|2.3.1.8. Biosynthesis/ acquisition of serine/ glycine/ alanine]

Name	Function
[gene\|151A61315ADAA7213502F15C0C0ED636A4C3EA7C\|aimA]	low affinity uptake of [metabolite\|serine], [metabolite\|glutamate], [metabolite\|asparagine], [metabolite\|glycine], [metabolite\|alanine], and [metabolite\|beta-alanine]
[gene\|9AD0E43119BDC65D5F67CE55CD9417E1E6BAE058\|aimB]	uptake of threonine and serine
[gene\|210C83EBEBD3DE4946BC511E0249D0032A7CE3D0\|bcaP]	uptake of branched-chain amino acids, threonine, serine, and asparagine
[gene\|BAE8062DA8538C9C83FFBA9684BECE9613EEFD2F\|glyA]	biosynthesis of glycine
[gene\|8AD1C7C761FF8B407A973381CA135C264B995CB7\|serA]	biosynthesis of serine
[gene\|50417B2FA0ED2258A13B1E708514F055297599EF\|serB]	biosynthesis of serine
[gene\|E7ED2FB756B47A0F2C73E42E4168D16F20BD7B1B\|serC]	biosynthesis of serine
[gene\|A10EA56A7EDA2DF712B5BB87D94A818E39940B44\|yrbD]	uptake of alanine

[category|SW.2.3.1.9|2.3.1.9. Biosynthesis/ acquisition of cysteine]

Name	Function
[gene\|741156D495BE3857683C8A0390764EAD83845ABC\|ascR]	regulation of sulphur metabolism
[gene\|5B9D5DA130DC3654F386684156BDC350DD05DB60\|cysE]	biosynthesis of cysteine
[gene\|D1FC976597E5583E40A4ED7234FBCA743AB01354\|cysK]	biosynthesis of cysteine, control of [protein\|50930C56C27D22715620A350220E3C56ADB41020\|cymR] activity
[gene\|F195C47849F4F6B4C56E3A386F5D8C84326B01C4\|mccA]	methionine-to-cysteine conversion
[gene\|314CB4923D15140E72B0ABAFE3E8BE9CA7310E10\|mccB]	methionine-to-cysteine conversion
[gene\|2056F8EEDF9D3027CFD808E8D0C5DF544DBDD3F3\|tcyA]	cystine uptake
[gene\|9400DF25487461E3738DDDC72BDDB1589281409D\|tcyB]	[metabolite\|cystine] and [metabolite\|diaminopimelate] uptake
[gene\|B453986691E1231A1C565D469A2A60EBFF2F6BD3\|tcyC]	cystine and diaminopimelate uptake
[gene\|A6A13C54177381CE78ABA2CFC2A3F2CE12099F15\|tcyJ]	[metabolite\|cystine] and [metabolite\|cysteinopantetheine] uptake
[gene\|A8FA40EACDB15CF53DDDA725A3AA5A6EB654FA8B\|tcyK]	[metabolite\|cystine] and [metabolite\|cysteinopantetheine] uptake
[gene\|350C97E4A4C60A6E2FF9610D50B4A49FB9F9B42D\|tcyL]	[metabolite\|cystine] and [metabolite\|cysteinopantetheine] uptake
[gene\|B1DD32A3B3D1C0C5391A40834940257357A2F30F\|tcyM]	[metabolite\|cystine] and [metabolite\|cysteinopantetheine] uptake
[gene\|B24763A732111026D21C828FF9BE73FB22A123CF\|tcyN]	[metabolite\|cystine] and [metabolite\|cysteinopantetheine] uptake
[gene\|EC287BBD7AB1EB44A33BF29144448F53D06AC6D9\|tcyP]	cystine and diaminopimelate uptake
[gene\|D96EEDABB73AC66E6AB772431819E7C767DC8B9A\|yxeM]	uptake and utilization of S-(2-succino)cysteine
[gene\|FFD5F07480A0E5A74852C69C436EE289BA72FC7F\|yxeN]	uptake and utilization of S-(2-succino)cysteine
[gene\|F8C800CF71D21A1F3265977C4F0EE191D0FFE36A\|yxeO]	uptake and utilization of S-(2-succino)cysteine

[category|SW.2.3.1.10|2.3.1.10. Biosynthesis/ acquisition of methionine/ S-adenosylmethionine]

Name	Function
[gene\|11421D5BD3AB6C205DDA0864F878E2B04340033F\|hom]	biosynthesis of methionine and threonine
[gene\|FF61DC6CA162EEC191CDFC802E721FCBD32EC098\|luxS]	methionine salvage
[gene\|1217330ECD588E24E42FF9FED2A097CEF32785F3\|metA]	biosynthesis of methionine
[gene\|1C0D38F23D3A2CAA1EB057A92D6F571D0D2AA724\|metC]	biosynthesis of methionine
[gene\|23F405D5B849E4EDC1D599F86C71DFD2E55C0305\|metE]	biosynthesis of methionine
[gene\|04DC792180FDC5E7916F2DBB2EC2C34369202FE0\|metI]	biosynthesis of methionine
[gene\|52D4DA0AA45F0774543786B55D18DF9DF53A5029\|metK]	S-adenosylmethionine synthesis
[gene\|D7254B7F31D3F4CD18172AFB0F526CAE5195BDB6\|metN]	[metabolite\|methionine] uptake
[gene\|F94070DD039A422055FFC35087FB87765F22E156\|metP]	[metabolite\|methionine] uptake
[gene\|0481A9C134A6EEC6F111AD0C03E2E345D6A315A0\|metQ]	[metabolite\|methionine] uptake
[gene\|32DD5C61F0F8147DEACBCBBE1283B4E2C88E96E9\|mtnA]	methionine salvage
[gene\|337F1E27C2E380DF8DCADE3581F74CFF52AFD224\|mtnB]	methionine salvage
[gene\|C7D9E701B2CA2C9E85D69CAD6E0A45BE590BAED9\|mtnD]	methionine salvage
[gene\|938E08D2C50649A52EC06B9A08C6A73598E68CE1\|mtnE]	methionine salvage
[gene\|E2475C56019C8EA3E05DC8FF89D8FC2751FA2544\|mtnK]	methionine salvage
[gene\|5B21D1E73A65B13CE4DDA32ABC71EFA54E8D1D8F\|mtnN]	methionine salvage
[gene\|CB12BCCF6CEADC0C64DD918E0BAE4748E358A67B\|mtnU]	methionine salvage
[gene\|42D2F9B958F62DFE447A1321E4109D676ECB899C\|mtnW]	methionine salvage
[gene\|91633E6AF9A715166AE05BD7E540463DE352AA20\|mtnX]	methionine salvage
[gene\|11B54D438CDD2EAA4A87A6B99851A3B123EA4A1F\|patB]	biosynthesis of methionine

[category|SW.2.3.1.11|2.3.1.11. Biosynthesis/ acquisition of methionine/ S-adenosylmethionine/ based on similarity]

Name	Function
[gene\|577723B2BF662A44D55DC84444ED64276D8DED17\|ybgG]	biosynthesis of methionine
[gene\|41AB43191DDB2E0698D92FFD1ECEF45100F1F3F0\|yitJ]	methionine biosynthesis, tetrahydrofolate interconversion
[gene\|3769B79A180412C0FE98B3FC54BA49750BAFEDF6\|yoaD]	methionine biosynthesis
[gene\|A866ACE8431EC3FF98ADC734D9322AE699ECBFAD\|yxjG]	unknown
[gene\|55459D8F0BBB2669EB9F25276A17F1A7EB322AF1\|yxjH]	unknown

[category|SW.2.3.1.12|2.3.1.12. Biosynthesis/ acquisition of branched-chain amino acids]

Name	Function
[gene\|210C83EBEBD3DE4946BC511E0249D0032A7CE3D0\|bcaP]	uptake of branched-chain amino acids, threonine, serine, and asparagine
[gene\|75A874F0C344E8404BE39C32EFF59CE562193640\|braB]	uptake of branched-chain amino acids
[gene\|8BB8BDA602CC26B0A9E8C22666F0EC539306CF39\|brnQ]	uptake of valine and isoleucine
[gene\|D0CF32BF81AA1DC7BBBC3E9B667A54F97260DF3F\|ilvA]	biosynthesis of branched-chain amino acids
[gene\|E6EDDB6D1EDA85D73A0B78A656511D38346A625B\|ilvB]	biosynthesis of branched-chain amino acids
[gene\|EC1CB2FD563EFDA391D13EB8ADFDC8C9734E9D57\|ilvC]	biosynthesis of branched-chain amino acids and [metabolite\|coenzyme A]
[gene\|8D08E5F1EC57A9B3EFFCD7D12D8F16B3B28AEFF0\|ilvD]	biosynthesis of branched-chain amino acids
[gene\|2A20EF701B9F78FC21A33D6BD8ED862323BA59A8\|ilvE]	biosynthesis of branched-chain amino acids
[gene\|49E2D2EE480C2FFDED0C35E3AF0DBED5AD819B5F\|ilvH]	biosynthesis of branched-chain amino acids
[gene\|8163996FCB9D02F771E7A04A91D5720027260F12\|ilvK]	biosynthesis of branched-chain amino acids
[gene\|1502AED337F59DFFCEAFF68FE111C5AA6155701B\|leuA]	biosynthesis of leucine
[gene\|105E3452D7F142A7D7616E35AF3FB753C9B63E38\|leuB]	biosynthesis of leucine
[gene\|AC459429A9C50463FD947C1CF9EA919B6FE3B335\|leuC]	biosynthesis of leucine
[gene\|0EB4C6EE398B14B9284FFAEDBC26C866CE2070D7\|leuD]	biosynthesis of leucine
[gene\|285D9E676B06119F9F4D33FC62615EC844D35BC3\|yabJ]	deamination of reactive intermediates generated in [metabolite\|isoleucine] biosynthesis

[category|SW.2.3.1.13|2.3.1.13. Biosynthesis/ acquisition of aromatic amino acids]

Name	Function
[gene\|75E331ABCDE1C60AAB4AC01229CED81B0AF50E1C\|aroA]	biosynthesis of aromatic amino acids
[gene\|58B782C1F7931F8671161455E65E3D5C72B0BB9C\|aroB]	biosynthesis of aromatic amino acids
[gene\|61EA842B400548A99504A40467796B983DD54634\|aroC]	biosynthesis of aromatic amino acids
[gene\|776D79C45DADA631D4A75B0773CFF471A87D9EEC\|aroD]	biosynthesis of aromatic amino acids
[gene\|CA00DFB480CBDC8AC31559958EF8E97E1E9BD4E1\|aroE]	biosynthesis of aromatic amino acids
[gene\|9712D0E655289C97315314BDEE1A0DF2ED2ADCA2\|aroF]	biosynthesis of aromatic amino acids
[gene\|5C2F7F9F5FCBFEDF77AC41725EFDA0FAF0FC3BC1\|aroH]	biosynthesis of aromatic amino acids
[gene\|5396A9C07F816D93468D60B637EFE81EC91AF6BB\|aroK]	biosynthesis of aromatic amino acids
[gene\|4D7D62B4CDA350DCDC04E6934B5E23ECE4C57870\|hisC]	biosynthesis of histidine and of aromatic amino acids
[gene\|E030E80134E9DED6ADBC73C7C7435024CDFD38B9\|mtrB]	regulation of tryptophan biosynthesis(and translation) attenuation in the trp operon;repression of the folate operon
[gene\|956E33AAAADB302EB8663E4B75C917242D3AD2C0\|pabA]	biosynthesis of folate and tryptophan
[gene\|D4CCF6727AAC048792E59717E588C36EB617249D\|pheA]	biosynthesis of phenylalanine
[gene\|354C71C2F6AFE620866D90595E6AC6CEFA5705C3\|rtpA]	regulation of tryptophan biosynthesis
[gene\|155FE26C148F7022948DD7539533AB6876571862\|trpA]	biosynthesis of tryptophan
[gene\|AEB1F4E28C5B2AFC7FCF65721D4D1A70D6FC38EE\|trpB]	biosynthesis of tryptophan
[gene\|0467447B10EE7C1FDF86022AB6FBDBABFD32A9E5\|trpC]	biosynthesis of tryptophan
[gene\|4CD2A930753175B7F533EA6B91478577CE80A29C\|trpD]	biosynthesis of tryptophan
[gene\|48C33A96F3B446440D4D9A86AA07AA3BA244063D\|trpE]	biosynthesis of tryptophan
[gene\|C6872585F9BD3717A4F49E96F7684C4A5AD1760D\|trpF]	biosynthesis of tryptophan
[gene\|97573C2D4FD8BE6B4C749C0644D053C9A0CBFFF3\|trpP]	tryptophan uptake
[gene\|DEB8358CE34F80560BE91F036659EF2C67A19623\|tyrA]	biosynthesis of tyrosine

[category|SW.2.3.1.14|2.3.1.14. Biosynthesis/ acquisition of histidine]

Name	Function
[gene\|148F0C7983250F50676D234DB713E532AA55DDBF\|hisA]	biosynthesis of histidine
[gene\|88ED20DFEBD5D7B985F99D4494142FBA699A1E91\|hisB]	biosynthesis of histidine
[gene\|4D7D62B4CDA350DCDC04E6934B5E23ECE4C57870\|hisC]	biosynthesis of histidine and of aromatic amino acids
[gene\|03274B80B2DFE0A2939981B0E0CB8C34A9B0B102\|hisD]	biosynthesis of histidine
[gene\|C22C15754859B2510E52622E6A5DFAF97A7AD4E5\|hisF]	biosynthesis of histidine
[gene\|183C8B4F28E601D670B3D997D333AF2B5C4A4759\|hisG]	biosynthesis of [metabolite\|histidine]
[gene\|DEB3122A3EA36545759FAA6F86F71F971CA5F011\|hisH]	biosynthesis of histidine
[gene\|5C84CA2A9E22173E144F519389F545F107A267D9\|hisI]	biosynthesis of histidine
[gene\|B6C931049CF7353042EB3714976735189ADAF0FD\|hisJ]	biosynthesis of histidine
[gene\|423AEC9D260BE53AD22851D999244B89BEB3E84D\|hutM]	histidine uptake
[gene\|37664AAEBFFDE1F7D17EA7C032805EA051FBE6AF\|prs]	phosphoribosylpyrophosphate synthesis (biosynthesis of histidine)

[category|SW.2.3.1.15|2.3.1.15. Biosynthesis/acquisition of L- and D-alanine]

Name	Function
[gene\|219586A3F378DC38EA076FD39B99D41136BDE722\|alaP]	uptake of D- and L-alanine and of ß-alanine
[gene\|62A9CD9AF72D0A48EC5ABC1585E2D8636D36D021\|alaT]	biosynthesis of L-alanine
[gene\|CB0B6C69CB5CFF6FE30C3F95991F309C8DE1E344\|alr]	peptidoglycan biosynthesis
[gene\|38989B6CB025AE110709E2EA2025EFD425328FFA\|dat]	peptidoglycan precursor biosynthesis

important publications

24163341

Page visits: 1996

Time of last update: 2025-03-18 08:58:19

Author of last update: ghost

Name	Function
[gene\|151A61315ADAA7213502F15C0C0ED636A4C3EA7C\|aimA]	low affinity uptake of [metabolite\|serine], [metabolite\|glutamate], [metabolite\|asparagine], [metabolite\|glycine], [metabolite\|alanine], and [metabolite\|beta-alanine]
[gene\|B84BE9F5BEFE3A295ED5580D66040CD28609A6A1\|alsT]	uptake of glutamine
[gene\|68F4E792B99F86AE9E8F06D2200E128937331F5D\|glnA]	glutamine biosynthesis, control of [protein\|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20\|tnrA] and [protein\|641C4BDD9702804642E1753A9C779E80FABB3919\|glnR] activity
[gene\|BAB70547672C855AEB3A4D4624044340CF582848\|glnH]	[metabolite\|glutamine] uptake
[gene\|C18B886D06879C64B64606371E85A7D4D22DCFAC\|glnK]	regulation of the [gene\|1A415DC85354373EA4866733C3AE43F510BD3C56\|glsA]-[gene\|E371BC4F613C40CB0E8C8CAA97387F3E6735D813\|glnT] operon
[gene\|4E6EA2EABBDAA427E8F9EE1AE1800AF8657CF18B\|glnL]	regulation of the glsA-glnT operon
[gene\|6CE6AFDBE85974B45041DE924A09CC9F56ED79D8\|glnM]	glutamine uptake
[gene\|CD32011A08697B2C121996A02F1BD7BE4F932778\|glnP]	glutamine uptake
[gene\|468BEA9EAEA589D683DB79B2C689A5C6A22AB67F\|glnQ]	glutamine uptake
[gene\|641C4BDD9702804642E1753A9C779E80FABB3919\|glnR]	regulation of glutamine synthesis
[gene\|E371BC4F613C40CB0E8C8CAA97387F3E6735D813\|glnT]	glutamine uptake
[gene\|44DF1B7E476AD58B3CCC39300FFE0132D0D32AD0\|gltA]	[metabolite\|glutamate] biosynthesis and control of [metabolite\|glutamate] degradation
[gene\|AA07CC52B2DD48ACC9D3375E9D531CB1ACBE485A\|gltB]	[metabolite\|glutamate] biosynthesis
[gene\|87BCAE725B02860156D50E1783F6DB68510C811E\|gltC]	regulation of the [metabolite\|glutamate] synthase operon ([gene\|44DF1B7E476AD58B3CCC39300FFE0132D0D32AD0\|gltA]-[gene\|AA07CC52B2DD48ACC9D3375E9D531CB1ACBE485A\|gltB])
[gene\|533EEB1A454D29800C9A00A0BE107ECEE2138DAB\|gltT]	[metabolite\|glutamate] and [metabolite\|aspartate] uptake
[gene\|796BD46066B1E6147048664FA78679B42FA9D628\|nrgA]	ammonium uptake
[gene\|EC7C2A0B5A9A30B2FAA0CF9EEB9830CE0E6F2219\|nrgB]	regulation of ammonium uptake
[gene\|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20\|tnrA]	regulation of nitrogen assimilation

Name	Function
[gene\|62F8E0D6BC9DA6390256FA8FB684EA5C9C722AE4\|ahrC]	transcriptional regulator of arginine metabolic genes
[gene\|8321DF6EE5B84CC9A4A5DF670E8611F4D61EBC7E\|argB]	biosynthesis of arginine
[gene\|62678D45FA1CB1B6AB801FB9F574DDE10DEE068D\|argC]	biosynthesis of arginine
[gene\|7FA5502FE82D55EC176F68B74B24293EC9B7D4D7\|argD]	biosynthesis of arginine
[gene\|11E7D77EF9439F817C10BF5D9671C5AE66AF06DC\|argF]	biosynthesis of [metabolite\|arginine]
[gene\|94E5DA4F460FBC02A186D1013C581179F13BCB3E\|argG]	biosynthesis of arginine
[gene\|571789ADA1F7B9DE0F9E205E2DEB9C9166F6C312\|argH]	biosynthesis of arginine
[gene\|0FF858E44B3C557EE2C8B3749A458F152E1C535C\|argJ]	biosynthesis of arginine
[gene\|8D9529D46E11D8B2826A98642706ADCBE1E3434A\|artP]	arginine uptake
[gene\|62BD291B91DB0358754957D84A1F3636C247A697\|artQ]	[metabolite\|arginine] uptake
[gene\|6882EF93EC82872B25C88104F62D6603D2514890\|artR]	[metabolite\|arginine] uptake
[gene\|4202EAE5D0B2A718382092423DD99E35FDE81218\|carA]	biosynthesis of [metabolite\|arginine]
[gene\|7E6386F1949A6F46E4332BAB8F803742EB076AF0\|carB]	biosynthesis of [metabolite\|arginine]
[gene\|9BFB16C12B31ABD70BBB921BCB9E4201E3BDC92D\|rocC]	arginine, ornithine and citrulline uptake
[gene\|B46A8BCEC56E6252712E30F8BF8DA6B836FDE2F6\|rocE]	arginine, ornithine and citrulline uptake
[gene\|FC93BA60BD185DE5EF31D5605F0B8294EC2E8E5A\|sr1]	control of arginine metabolism, glycolysis, and sporulation

Name	Function
[gene\|741156D495BE3857683C8A0390764EAD83845ABC\|ascR]	regulation of sulphur metabolism
[gene\|5B9D5DA130DC3654F386684156BDC350DD05DB60\|cysE]	biosynthesis of cysteine
[gene\|D1FC976597E5583E40A4ED7234FBCA743AB01354\|cysK]	biosynthesis of cysteine, control of [protein\|50930C56C27D22715620A350220E3C56ADB41020\|cymR] activity
[gene\|F195C47849F4F6B4C56E3A386F5D8C84326B01C4\|mccA]	methionine-to-cysteine conversion
[gene\|314CB4923D15140E72B0ABAFE3E8BE9CA7310E10\|mccB]	methionine-to-cysteine conversion
[gene\|2056F8EEDF9D3027CFD808E8D0C5DF544DBDD3F3\|tcyA]	cystine uptake
[gene\|9400DF25487461E3738DDDC72BDDB1589281409D\|tcyB]	[metabolite\|cystine] and [metabolite\|diaminopimelate] uptake
[gene\|B453986691E1231A1C565D469A2A60EBFF2F6BD3\|tcyC]	cystine and diaminopimelate uptake
[gene\|A6A13C54177381CE78ABA2CFC2A3F2CE12099F15\|tcyJ]	[metabolite\|cystine] and [metabolite\|cysteinopantetheine] uptake
[gene\|A8FA40EACDB15CF53DDDA725A3AA5A6EB654FA8B\|tcyK]	[metabolite\|cystine] and [metabolite\|cysteinopantetheine] uptake
[gene\|350C97E4A4C60A6E2FF9610D50B4A49FB9F9B42D\|tcyL]	[metabolite\|cystine] and [metabolite\|cysteinopantetheine] uptake
[gene\|B1DD32A3B3D1C0C5391A40834940257357A2F30F\|tcyM]	[metabolite\|cystine] and [metabolite\|cysteinopantetheine] uptake
[gene\|B24763A732111026D21C828FF9BE73FB22A123CF\|tcyN]	[metabolite\|cystine] and [metabolite\|cysteinopantetheine] uptake
[gene\|EC287BBD7AB1EB44A33BF29144448F53D06AC6D9\|tcyP]	cystine and diaminopimelate uptake
[gene\|D96EEDABB73AC66E6AB772431819E7C767DC8B9A\|yxeM]	uptake and utilization of S-(2-succino)cysteine
[gene\|FFD5F07480A0E5A74852C69C436EE289BA72FC7F\|yxeN]	uptake and utilization of S-(2-succino)cysteine
[gene\|F8C800CF71D21A1F3265977C4F0EE191D0FFE36A\|yxeO]	uptake and utilization of S-(2-succino)cysteine

Name	Function
[gene\|11421D5BD3AB6C205DDA0864F878E2B04340033F\|hom]	biosynthesis of methionine and threonine
[gene\|FF61DC6CA162EEC191CDFC802E721FCBD32EC098\|luxS]	methionine salvage
[gene\|1217330ECD588E24E42FF9FED2A097CEF32785F3\|metA]	biosynthesis of methionine
[gene\|1C0D38F23D3A2CAA1EB057A92D6F571D0D2AA724\|metC]	biosynthesis of methionine
[gene\|23F405D5B849E4EDC1D599F86C71DFD2E55C0305\|metE]	biosynthesis of methionine
[gene\|04DC792180FDC5E7916F2DBB2EC2C34369202FE0\|metI]	biosynthesis of methionine
[gene\|52D4DA0AA45F0774543786B55D18DF9DF53A5029\|metK]	S-adenosylmethionine synthesis
[gene\|D7254B7F31D3F4CD18172AFB0F526CAE5195BDB6\|metN]	[metabolite\|methionine] uptake
[gene\|F94070DD039A422055FFC35087FB87765F22E156\|metP]	[metabolite\|methionine] uptake
[gene\|0481A9C134A6EEC6F111AD0C03E2E345D6A315A0\|metQ]	[metabolite\|methionine] uptake
[gene\|32DD5C61F0F8147DEACBCBBE1283B4E2C88E96E9\|mtnA]	methionine salvage
[gene\|337F1E27C2E380DF8DCADE3581F74CFF52AFD224\|mtnB]	methionine salvage
[gene\|C7D9E701B2CA2C9E85D69CAD6E0A45BE590BAED9\|mtnD]	methionine salvage
[gene\|938E08D2C50649A52EC06B9A08C6A73598E68CE1\|mtnE]	methionine salvage
[gene\|E2475C56019C8EA3E05DC8FF89D8FC2751FA2544\|mtnK]	methionine salvage
[gene\|5B21D1E73A65B13CE4DDA32ABC71EFA54E8D1D8F\|mtnN]	methionine salvage
[gene\|CB12BCCF6CEADC0C64DD918E0BAE4748E358A67B\|mtnU]	methionine salvage
[gene\|42D2F9B958F62DFE447A1321E4109D676ECB899C\|mtnW]	methionine salvage
[gene\|91633E6AF9A715166AE05BD7E540463DE352AA20\|mtnX]	methionine salvage
[gene\|11B54D438CDD2EAA4A87A6B99851A3B123EA4A1F\|patB]	biosynthesis of methionine

Name	Function
[gene\|210C83EBEBD3DE4946BC511E0249D0032A7CE3D0\|bcaP]	uptake of branched-chain amino acids, threonine, serine, and asparagine
[gene\|75A874F0C344E8404BE39C32EFF59CE562193640\|braB]	uptake of branched-chain amino acids
[gene\|8BB8BDA602CC26B0A9E8C22666F0EC539306CF39\|brnQ]	uptake of valine and isoleucine
[gene\|D0CF32BF81AA1DC7BBBC3E9B667A54F97260DF3F\|ilvA]	biosynthesis of branched-chain amino acids
[gene\|E6EDDB6D1EDA85D73A0B78A656511D38346A625B\|ilvB]	biosynthesis of branched-chain amino acids
[gene\|EC1CB2FD563EFDA391D13EB8ADFDC8C9734E9D57\|ilvC]	biosynthesis of branched-chain amino acids and [metabolite\|coenzyme A]
[gene\|8D08E5F1EC57A9B3EFFCD7D12D8F16B3B28AEFF0\|ilvD]	biosynthesis of branched-chain amino acids
[gene\|2A20EF701B9F78FC21A33D6BD8ED862323BA59A8\|ilvE]	biosynthesis of branched-chain amino acids
[gene\|49E2D2EE480C2FFDED0C35E3AF0DBED5AD819B5F\|ilvH]	biosynthesis of branched-chain amino acids
[gene\|8163996FCB9D02F771E7A04A91D5720027260F12\|ilvK]	biosynthesis of branched-chain amino acids
[gene\|1502AED337F59DFFCEAFF68FE111C5AA6155701B\|leuA]	biosynthesis of leucine
[gene\|105E3452D7F142A7D7616E35AF3FB753C9B63E38\|leuB]	biosynthesis of leucine
[gene\|AC459429A9C50463FD947C1CF9EA919B6FE3B335\|leuC]	biosynthesis of leucine
[gene\|0EB4C6EE398B14B9284FFAEDBC26C866CE2070D7\|leuD]	biosynthesis of leucine
[gene\|285D9E676B06119F9F4D33FC62615EC844D35BC3\|yabJ]	deamination of reactive intermediates generated in [metabolite\|isoleucine] biosynthesis