SubtiWiki SubtiWiki
Potential protein homologs

The 21st International Conference on Bacilli has been postponed to 2022 and will take place in Prague.

Potential protein homologs

Description

The following list presents the potential protein homologs for PamR using FASTA alignment tool. For all top hits, a bidirectional analysis was performed and those showing the same pair of proteins are considered to be potential orthologs.
The column Best hit bidirectional informs if PamR was found to be best hit in the alignment with the protein of the respective organism.

PamR

OrganismProtein nameIdentitySimilarityBidirectional
best hit
Bacillus licheniformisYwaE27.1%61.2%No
Bacillus anthracisGBAA_322027.7%62.3%No
Listeria monocytogenesCAD0104028.8%65.4%No
Staphylococcus aureusSAOUHSC_0031428.9%62.0%Yes
Lactococcus lactisRmaJ28.8%63.5%No
Streptococcus pneumoniaeSpr037626.4%64.8%No
Streptococcus pyogenesGGS_023032.9%70.0%No
Clostridium acetobutylicumCA_C019730.4%60.9%No
Mycoplasma pneumoniae No significant homolog No significant homolog
JCVI-syn3A No significant homolog No significant homolog
Corynebacterium glutamicumBAB9990434.7%66.7%Yes
Streptomyces coelicolorCAB9588636.0%71.9%Yes
Escherichia coliMarR30.9%64.9%No
Synechocystis sp.BAD0203425.3%65.5%No
Synechococcus elongatusSynpcc7942_115923.2%58.1%No
Borrelia burgdorferi No significant homolog No significant homolog