transcriptional repressor, GntR family, control of cell envelope stress responses in response to ramoplanin
function
control of cell envelope stress responses
product
transcriptional repressor (GntR family)
Genomic Context
categories
[category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.9|Newly identified competence genes][category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.5|Transcription factors/ other][category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.3|Sporulation/ other][category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.13|Resistance against toxins/ antibiotics][category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.5|Cold stress proteins][SW|Categories] containing this gene/protein
[SW|transcription factors and their control], [SW|cold stress proteins], [SW|resistance against toxins/ antibiotics]This gene is a member of the following [SW|regulons]
[SW|YtrA regulon]Gene
Coordinates on the chromosome (coding sequence)
3,118,847 -> 3,119,239
The protein
Protein family
[SW|GntR family] of transcription factorsStructure
[PDB|3NEU] (similar protein from ''Listeria innocua'', 41% identity)Expression and Regulation
Operon
''[protein|search|ytrG]-[protein|search|ytrA]-[protein|search|ytrB]-[protein|search|ytrC]-[protein|search|ytrD]-[protein|search|ytrE]-[protein|search|ytrF]'' [Pubmed|10986249,21856850][SW|Sigma factor]
[protein|search|SigA] [Pubmed|10986249]Regulation
induced by ramoplanin ([protein|search|YtrA]) [Pubmed|21856850]expressed early in the stationary phase [Pubmed|10986249]induced by cold shock (5-fold) [Pubmed|12399512]Regulatory mechanism
[protein|search|YtrA]: transcription repression [Pubmed|10986249,21856850]References
10986249,12399512,23504016,21856850 
